Evidence map›Paper›PMID 39879145›Full record

ArticleNano letters2025

Impact of Ligand-Induced Oligomer Dissociation on Enzyme Diffusion, Directly Observed at the Single-Molecule Level.

Yulia D Yancheva, Saniye G Kaya, Alexander Belyy, Marco W Fraaije, Katarzyna M Tych

Abstract read
In one paragraph

Article in Nano letters, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yulia D YanchevaChemical Biology 1, University of Groningen, Nijenborgh 7, 9747 AG Groningen, The Netherlands.
Saniye G KayaMolecular Enzymology, University of Groningen, Nijenborgh 3, 9747 AG Groningen, The Netherlands.ORCID 0000-0002-5663-1165
Alexander BelyyMembrane Enzymology, University of Groningen, Nijenborgh 3, 9747 AG Groningen, The Netherlands.
Marco W FraaijeMolecular Enzymology, University of Groningen, Nijenborgh 3, 9747 AG Groningen, The Netherlands.ORCID 0000-0001-6346-5014
Katarzyna M TychChemical Biology 1, University of Groningen, Nijenborgh 7, 9747 AG Groningen, The Netherlands.ORCID 0000-0001-9091-0507

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The existence of the phenomenon of enhanced enzyme diffusion (EED) has been a topic of debate in recent literature. One proposed mechanism to explain the origin of EED is oligomeric enzyme dissociation. We used mass photometry (MP), a label-free single-molecule technique, to investigate the dependence of the oligomeric states of several enzymes on their ligands. The studied enzymes of interest are catalase, aldolase, alkaline phosphatase, and vanillyl-alcohol oxidase (VAO). We compared the ratios of oligomeric states in the presence and absence of the substrate as well as different substrate and inhibitor concentrations. Catalase and aldolase were found to dissociate into smaller oligomers in the presence of their substrates, independently of inhibition, while for alkaline phosphatase and VAO, different behaviors were observed. Thus, we have identified a possible mechanism which explains the previously observed diffusion enhancement

Indexed as

Alkaline PhosphataseCatalaseAlcohol OxidoreductasesDiffusionFructose-Bisphosphate AldolaseLigandsProtein MultimerizationSingle Molecule ImagingAlcohol OxidoreductasesAlkaline PhosphataseCatalaseFructose-Bisphosphate AldolaseLigandsenhanced enzyme diffusionlabel-freemass photometryoligomer dissociationsingle-molecule

Identifiers

PMID39879145
PMCPMC11831976

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.