Evidence map›Paper›PMID 39873514›Full record

ArticleMicrobiology spectrum2025

Ribosome profiling reveals differences in global translational vs transcriptional gene expression changes during early

Vasanthakrishna Mundodi, Saket Choudhary, Andrew D Smith, David Kadosh

Abstract read
In one paragraph

Article in Microbiology spectrum, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Advancing the Understanding of the Mo-CBPProbiotics and antimicrobial proteins · 2026
    Article
  3. Review
  4. Review
  5. StudyingPharmaceuticals (Basel, Switzerland) · 2025
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Vasanthakrishna Mundodi *Department of Microbiology, Immunology & Molecular Genetics, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA.
Saket Choudhary *Quantitative and Computational Biology, University of Southern California, Los Angeles, California, USA.
Andrew D SmithQuantitative and Computational Biology, University of Southern California, Los Angeles, California, USA.
David KadoshDepartment of Microbiology, Immunology & Molecular Genetics, University of Texas Health Science Center at San Antonio, San Antonio, Texas, USA.ORCID 0000-0001-7237-8481

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Robin Jean Leach · 1991 to 2026
$59.1M
Translational Control of Morphology and Virulence in Candida albicansR01AI127692 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI KADOSH, DAVID · 2018 to 2022
$1.9M
Illumina NovaSeq 6000 Sequencing SystemS10OD030311 · OD · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI LAI, ZHAO · 2021 to 2021
$600k
Regulation of Candida albicans gene expression in response to host environmental stressesR56AI167359 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI KADOSH, DAVID · 2023 to 2023
$582k
Translational Control of Biofilm Development and Maintenance in Oral CandidiasisR21AI129883 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI KADOSH, DAVID · 2017 to 2018
$443k
Translational Regulation of Candida glabrata Azole ResistanceR21AI172207 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI KADOSH, DAVID · 2023 to 2024
$426k
Translational Control of Conidial Germination in Aspergillus fumigatusR21AI186304 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI KADOSH, DAVID · 2024 to 2025
$426k
Regulation of Multidrug Resistance in the Emerging Human Fungal Pathogen Candida aurisR21AI164719 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI KADOSH, DAVID · 2021 to 2022
$426k
Translational Control of Host Environmental Stress Responses in Candida albicansR01AI178973 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI KADOSH, DAVID · 2024 to 2024
$247k
HHS | National Institutes of Health (NIH) R01AI127692, R21AI129883, R21AI164719, R21AI172207, R21AI186304, R56AI167359, and R01AI178973NCI NIH HHS P30 CA054174NIAID NIH HHS R01 AI127692NIAID NIH HHS R01 AI178973NIAID NIH HHS R21 AI129883NIAID NIH HHS R21 AI164719NIAID NIH HHS R21 AI172207NIAID NIH HHS R21 AI186304NIAID NIH HHS R56 AI167359NIH HHS S10 OD030311
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

BiofilmsCandida albicansGene Expression Regulation, FungalProtein BiosynthesisRibosomesFungal ProteinsGene Expression ProfilingHumansRibosome ProfilingTranscription, GeneticFungal ProteinsbiofilmsCandida albicansribosome profilingtranscriptometranslatome

Identifiers

PMID39873514
PMCPMC11878023

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.