Evidence map›Paper›PMID 39871506›Full record

ArticleACS nano2025

Large and Stable Nanopores Formed by Complement Component 9 for Characterizing Single Folded Proteins.

Wachara Chanakul, Anasua Mukhopadhyay, Saurabh Awasthi, Anna D Protopopova, Alessandro Ianiro, Michael Mayer

Abstract read
In one paragraph

Article in ACS nano, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Supramolecular Interactions Modulate RNA:DNA Folding Observed via Nanopore Sensing.Angewandte Chemie (International ed. in English) · 2025
    Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Wachara ChanakulAdolphe Merkle Institute, University of Fribourg, Fribourg 1700, Switzerland.ORCID 0009-0009-6067-8263
Anasua MukhopadhyayAdolphe Merkle Institute, University of Fribourg, Fribourg 1700, Switzerland.
Saurabh AwasthiAdolphe Merkle Institute, University of Fribourg, Fribourg 1700, Switzerland.ORCID 0000-0002-7243-5578
Anna D ProtopopovaAdolphe Merkle Institute, University of Fribourg, Fribourg 1700, Switzerland.
Alessandro IaniroAdolphe Merkle Institute, University of Fribourg, Fribourg 1700, Switzerland.ORCID 0000-0003-4709-4350
Michael MayerAdolphe Merkle Institute, University of Fribourg, Fribourg 1700, Switzerland.ORCID 0000-0002-6148-5756

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biological nanopores offer a promising approach for single-molecule analysis of nucleic acids, peptides, and proteins. The work presented here introduces a biological nanopore formed by the self-assembly of complement component 9 (C9). This exceptionally large and cylindrical protein pore is composed of 20 ± 4 monomers of C9 resulting in a diameter of 10 ± 4 nm and an effective pore length of 13 nm. These poly(C9) pores remain stable for up to 30 min without indications of gating, flickering, or clogging across a range of transmembrane voltages (-150 to +150 mV) and ionic strengths (50 to 1000 mM). At physiologic pH, the ring-shaped distribution of negative and positive surface charges in the lumen of the pore enables capture of analyte proteins by electro-osmotic flow and leads to residence times of analyte proteins whose most probable values can exceed 300 μs. We used poly(C9) nanopores to determine the volume and shape of unlabeled folded proteins with molecular weights between 9 and 230 kDa with unprecedented accuracy in the context of resistive pulse recordings. Finally, poly(C9) pores made it possible to distinguish between the open and closed conformations of adenylate kinase based on differences in current modulations within resistive pulses and the corresponding differences in approximations of their shape. Thus, poly(C9) nanopores enable highly sensitive and accurate characterization of a wide range of natively folded proteins on a single molecule level.

Indexed as

NanoporesProtein Foldingamphipolchange in protein conformationcomplement component 9large biological nanoporemembrane attack complexprotein nanoporeresistive pulse recordingsingle-molecule

Identifiers

PMID39871506
PMCPMC11823641

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.