Evidence map›Paper›PMID 39870674›Full record

ArticleScientific data2025

NIRS-BIDS: Brain Imaging Data Structure Extended to Near-Infrared Spectroscopy.

Robert Luke, Robert Oostenveld, Helena Cockx, Guiomar Niso, Maureen J Shader, Felipe Orihuela-Espina, Hamish Innes-Brown, Stephen Tucker, David Boas, Meryem A Yücel and 7 more

Abstract read
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. DermIDS: Dermatology imaging data structure for scalable and interoperable AI systems.Proceedings of SPIE--the International Society for Optical Engineering · 2026
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. From lab to life: challenges and perspectives of fNIRS for haemodynamic-based neurofeedback in real-world environments.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Robert LukeMacquarie University Hearing & Department of Linguistics, Australian Hearing Hub, Sydney, Australia.
Robert OostenveldDonders Institute for Brain, Cognition and Behaviour, Radboud University, Nijmegen, the Netherlands.
Helena CockxDonders Institute for Brain, Cognition and Behaviour, Radboud University, Nijmegen, the Netherlands.
Guiomar NisoInstituto Cajal and Cajal International Neuroscience Center, CSIC, Madrid, Spain, CSIC, Madrid, Spain.ORCID http://orcid.org/0000-0001-5872-8924
Maureen J ShaderDepartment of Speech, Language, and Hearing Sciences, Purdue University, West Lafayette, IN, USA.
Felipe Orihuela-EspinaSchool of Computer Science, University of Birmingham, Birmingham, United Kingdom.ORCID http://orcid.org/0000-0001-8963-7283
Hamish Innes-BrownEriksholm Research Institute, Snekkersten, Denmark.
Stephen TuckerNeurophotonics Center, Department of Biomedical Engineering, Boston University, Boston, MA, USA.
David BoasNeurophotonics Center, Department of Biomedical Engineering, Boston University, Boston, MA, USA.ORCID http://orcid.org/0000-0002-6709-7711
Meryem A YücelNeurophotonics Center, Department of Biomedical Engineering, Boston University, Boston, MA, USA.
Remi GauInstitute of Psychology, Université Catholique de Louvain, Louvain la Neuve, Belgium.ORCID http://orcid.org/0000-0002-1535-9767
Taylor SaloLifespan Informatics & Neuroimaging Center, University of Pennsylvania, Philadelphia, PA, USA.
Stefan AppelhoffCenter for Adaptive Rationality, Max Planck Institute for Human Development, Berlin, Germany.
Christopher J MarkiewiczDepartment of Psychology, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-6533-164X
David McAlpineMacquarie University Hearing & Department of Linguistics, Australian Hearing Hub, Sydney, Australia.
BIDS Maintainers
Luca PolloniniDepartment of Engineering Technology, University of Houston, Houston, TX, USA. lpollonini@uh.edu.ORCID http://orcid.org/0000-0003-2955-6355

Funding

The Neuroscience of Everyday World- A novel wearable system for continuous measurement of brain functionU01EB029856 · NIBIB · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI BOAS, DAVID A, KIRAN, SWATHI · 2020 to 2024
$6.5M
Graduate Training at the Interface of Neuroscience, Optical Engineering and Data ScienceT32NS136080 · NINDS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI David A Boas, Jerry L Chen · 2024 to 2026
$661k
National Science Foundation (NSF) CNS 1650536National Science Foundation (NSF) CNS 2137255NIBIB NIH HHS U01 EB029856NINDS NIH HHS T32 NS136080
6 · The paper itself

Abstract

Functional near-infrared spectroscopy (fNIRS) is an increasingly popular neuroimaging technique that measures cortical hemodynamic activity in a non-invasive and portable fashion. Although the fNIRS community has been successful in disseminating open-source processing tools and a standard file format (SNIRF), reproducible research and sharing of fNIRS data amongst researchers has been hindered by a lack of standards and clarity over how study data should be organized and stored. This problem is not new in neuroimaging, and it became evident years ago with the proliferation of publicly available neuroimaging datasets. To solve this critical issue, the neuroimaging community created the Brain Imaging Data Structure (BIDS) that specifies standards for how datasets should be organized to facilitate sharing and reproducibility of science. Currently, BIDS supports dozens of neuroimaging modalities including MRI, EEG, MEG, PET, and many others. In this paper, we present the extension of BIDS for NIRS data alongside tools that may assist researchers in organizing existing and new data with the goal of promoting public disseminations of fNIRS datasets.

Indexed as

BrainNeuroimagingDatasets as TopicHumansSpectroscopy, Near-Infrared

Identifiers

PMID39870674
PMCPMC11772744

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.