Evidence map›Paper›PMID 39870667›Full record

ArticleScientific reports2025

An endoscopic ultrasound-based interpretable deep learning model and nomogram for distinguishing pancreatic neuroendocrine tumors from pancreatic cancer.

Nan Yi, Shuangyang Mo, Yan Zhang, Qi Jiang, Yingwei Wang, Cheng Huang, Shanyu Qin, Haixing Jiang

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Nan YiGastroenterology Department, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Shuangyang MoGastroenterology Department, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Yan ZhangThe First Affiliated Hospital of Shandong First Medical University & Shandong Provincial Qianfoshan Hospital, Jinan, China.
Qi JiangGastroenterology Department, The First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Yingwei WangLiuzhou People's Hospital Affiliated to Guangxi Medical University, Liuzhou, China.
Cheng HuangLiuzhou People's Hospital Affiliated to Guangxi Medical University, Liuzhou, China.
Shanyu QinGastroenterology Department, The First Affiliated Hospital of Guangxi Medical University, Nanning, China. qinshanyu@gxmu.edu.cn.
Haixing JiangGastroenterology Department, The First Affiliated Hospital of Guangxi Medical University, Nanning, China. gxjianghx@163.com.

Funding

the Scientific Research Project of Liuzhou People's Hospital affiliated with Guangxi Medical University lry202309The Scientific Research Project of Liuzhou Science and Technology Bureau 2024YB0101B005
6 · The paper itself

Abstract

To retrospectively develop and validate an interpretable deep learning model and nomogram utilizing endoscopic ultrasound (EUS) images to predict pancreatic neuroendocrine tumors (PNETs). Following confirmation via pathological examination, a retrospective analysis was performed on a cohort of 266 patients, comprising 115 individuals diagnosed with PNETs and 151 with pancreatic cancer. These patients were randomly assigned to the training or test group in a 7:3 ratio. The least absolute shrinkage and selection operator algorithm was employed to reduce the dimensionality of deep learning (DL) features extracted from pre-standardized EUS images. The retained nonzero coefficient features were subsequently applied to develop predictive eight DL models based on distinct machine learning algorithms. The optimal DL model was identified and used to establish a clinical signature, which subsequently informed the construction and evaluation of a nomogram. Gradient-weighted Class Activation Mapping (Grad-CAM) and Shapley Additive Explanations (SHAP) were implemented to interpret and visualize the model outputs. A total of 2048 DL features were initially extracted, from which only 27 features with coefficients greater than zero were retained. The support vector machine (SVM) DL model demonstrated exceptional performance, achieving area under the curve (AUC) values of 0.948 and 0.795 in the training and test groups, respectively. Additionally, a nomogram was developed, incorporating both DL and clinical signatures, and was visually represented for practical application. Finally, the calibration curves, decision curve analysis (DCA) plots, and clinical impact curves (CIC) exhibited by the DL model and nomogram indicated high accuracy. The application of Grad-CAM and SHAP enhanced the interpretability of these models. These methodologies contributed substantial net benefits to clinical decision-making processes. A novel interpretable DL model and nomogram were developed and validated using EUS images, cooperating with machine learning algorithms. This approach demonstrates significant potential for enhancing the clinical applicability of EUS in predicting PNETs from pancreatic cancer, thereby offering valuable insights for future research and implementation.

Indexed as

Deep LearningEndosonographyNeuroendocrine TumorsNomogramsPancreatic NeoplasmsAdultAgedAlgorithmsDiagnosis, DifferentialFemaleHumansMaleMiddle AgedRetrospective StudiesSupport Vector MachineDeep learningEndoscopic ultrasoundGradient-weighted class activation mappingMachine learningNomogramPancreatic neuroendocrine tumorsShapley Additive explanations

Identifiers

PMID39870667
PMCPMC11772604

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.