Evidence map›Paper›PMID 39868320›Full record

ArticlebioRxiv : the preprint server for biology2025

Single-Walled Carbon Nanotube Probes for Protease Characterization Directly in Cell-Free Expression Reactions.

Sepehr Hejazi, Ryan Godin, Vito Jurasic, Nigel F Reuel

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Sepehr HejaziChemical and Biological Engineering - Iowa State University, 618 Bissell Rd, Ames, IA 50011.
Ryan GodinChemical and Biological Engineering - Iowa State University, 618 Bissell Rd, Ames, IA 50011.
Vito JurasicChemical and Biological Engineering - Iowa State University, 618 Bissell Rd, Ames, IA 50011.
Nigel F ReuelChemical and Biological Engineering - Iowa State University, 618 Bissell Rd, Ames, IA 50011.

Funding

Unsupervised optimization of protein therapeutics using closed-loop in vitro synthesis, nanosensing,and deep-learningR35GM138265 · NIGMS · IOWA STATE UNIVERSITY · PI Nigel F Reuel · 2020 to 2026
$2.3M
NIGMS NIH HHS R35 GM138265
6 · The paper itself

Abstract

Proteins can be rapidly prototyped with cell-free expression (CFE) but in most cases there is a lack of probes or assays to measure their function directly in the cell lysate, thereby limiting the throughput of these screens. Increased throughput is needed to build standardized, sequence to function data sets to feed machine learning guided protein optimization. Herein, we describe the use of fluorescent single-walled carbon nanotubes (SWCNT) as effective probes for measuring protease activity directly in cell-free lysate. Substrate proteins were conjugated to carboxymethyl cellulose-wrapped SWCNT, yielding stable and sensitive probes for protease detection with a detection limit of 6.4 ng/mL for bacterial protease from

Indexed as

BiosensorsEnzyme AssayProtein EngineeringSingle-walled Carbon Nanotubes

Identifiers

PMID39868320
PMCPMC11760254

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.