Evidence map›Paper›PMID 39868227›Full record

ArticlebioRxiv : the preprint server for biology2025

Proximal tubule cells contribute to the thin descending limb of the loop of Henle during mouse kidney development.

Eunah Chung, Fariba Nosrati, Mike Adam, Andrew Potter, Mohammed Sayed, Christopher Ahn, Benjamin D Humphreys, Hee-Woong Lim, Yueh-Chiang Hu, S Steven Potter and 1 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Eunah ChungDivision of Nephrology and Hypertension, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Fariba NosratiDivision of Nephrology and Hypertension, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
Mike AdamDivision of Developmental Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Andrew PotterHeart Institute, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Mohammed SayedDivision of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Christopher AhnDivision of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Benjamin D HumphreysDivision of Nephrology, Department of Medicine, Washington University, St. Louis, MO, USA.ORCID 0000-0002-6420-8703
Hee-Woong LimDivision of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.ORCID 0000-0001-8599-1808
Yueh-Chiang HuDivision of Developmental Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
S Steven PotterDivision of Developmental Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.
Joo-Seop ParkDivision of Nephrology and Hypertension, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.ORCID 0000-0002-4190-4386

Funding

The Role of Renal Interstitium in Kidney DevelopmentR01DK127634 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI CARROLL, THOMAS JOSEPH, PARK, JOO-SEOP · 2021 to 2024
$2.8M
Hox Genes & Lineage InfidelityR01DK120842 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PARK, JOO-SEOP · 2019 to 2023
$2.5M
Hedgehog gene regulatory networks in the mammalian kidneyR01DK131052 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PARK, JOO-SEOP · 2022 to 2025
$1.9M
Retinoic acid gene regulatory networks in the mammalian kidneyR01DK120847 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PARK, JOO-SEOP · 2019 to 2022
$1.7M
Gene regulatory networks in the proximal tubules of the mammalian kidneyR01DK125577 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PARK, JOO-SEOP · 2020 to 2022
$1.4M
NIDDK NIH HHS R01 DK120842NIDDK NIH HHS R01 DK120847NIDDK NIH HHS R01 DK125577NIDDK NIH HHS R01 DK127634NIDDK NIH HHS R01 DK131052
6 · The paper itself

Abstract

Background: The thin descending limb of the loop of Henle is crucial for urine concentration, as it facilitates passive water reabsorption. Despite its importance, little is known about how this nephron segment forms during kidney development. Methods: We assembled a large single-cell RNA sequencing (scRNA-seq) dataset by integrating multiple datasets of non-mutant developing mouse kidneys to identify developing thin descending limb cells. To test whether those cells originate from proximal tubule cells, we generated a proximal tubule-specific Cre line, Results: From our scRNA-seq dataset, we identified a small cluster of cells distinct from both the proximal tubule and the thick ascending limb of the loop of Henle. Those cells exhibited high expression of thin descending limb marker genes, including Conclusion: Our findings shed new light on the developmental origin of thin descending limb cells and highlight the importance of Hnf4a in regulating their formation.

Identifiers

PMID39868227
PMCPMC11761803

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.