Evidence map›Paper›PMID 39866376›Full record

ArticleBiology methods & protocols2025

Evaluation of a surrogate virus neutralization assay for detecting neutralizing antibodies against SARS-CoV-2 in an African population.

Lilian Nkinda, Victoria Shayo, Salim Masoud, Godfrey Barabona, Isaac Ngare, Ponsian P Kunambi, Emmanuel Nkuwi, Doreen Kamori, Frank Msafiri, Elisha Osati and 8 more

Abstract read
In one paragraph

Article in Biology methods & protocols, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Lilian NkindaCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.ORCID https://orcid.org/0000-0002-6252-9749
Victoria ShayoCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.
Salim MasoudCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.
Godfrey BarabonaCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.
Isaac NgareDivision of Infection and Immunity, Joint Research Centre for Retrovirus Infection, Kumamoto University, 860-0811 Kumamoto, Japan.
Ponsian P KunambiCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.
Emmanuel NkuwiDivision of Infection and Immunity, Joint Research Centre for Retrovirus Infection, Kumamoto University, 860-0811 Kumamoto, Japan.
Doreen KamoriCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.
Frank MsafiriCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.
Elisha OsatiCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.ORCID https://orcid.org/0000-0003-1192-4148
Frank Eric HassanNational Institution for Medical Research, Muhimbili Centre, 11101 Dar es Salaam, Tanzania.
Juma KisuseNational Institution for Medical Research, Muhimbili Centre, 11101 Dar es Salaam, Tanzania.
Benson KidenyaDepartment of Biochemistry and Molecular Biology, Catholic University of Health and Allied Sciences - Bugando, 1464 Mwanza, Tanzania.
Sayoki MfinangaNational Institution for Medical Research, Muhimbili Centre, 11101 Dar es Salaam, Tanzania.ORCID https://orcid.org/0000-0001-9067-2684
Mbazi SenkoroNational Institution for Medical Research, Muhimbili Centre, 11101 Dar es Salaam, Tanzania.
Takamasa UenoCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.ORCID https://orcid.org/0000-0003-4852-4236
Eligius LyamuyaCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.
Emmanuel BalandyaCampus College of Medicine, Muhimbili University of Health and Allied Sciences, 65001 Dar es Salaam, Tanzania.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The global resurgence of coronaviruses and the move to incorporate COVID-19 vaccines into the expanded program for immunization have warranted for a high-throughput and low-cost assay to measure and quantify mounted neutralizing antibodies as an indicator for protection against SARS-CoV-2. Hence, we evaluated the surrogate-virus-neutralization-assay (sVNT) as an alternative assay to the pseudo-virus neutralization assay (pVNT). The sVNT was used to measure neutralizing antibodies among 119 infected and/or vaccinated blood samples, against wild-type SARS-CoV-2 (WT) and the Omicron-variant with reference to the pVNT. Four different cut-offs were assessed for suitability in distinguishing neutralizers: the manufacturer (>30%), literature-based (>50%) and (>80%), and population-based (>27.69%). The obtained data was analyzed using "R" through its integrated development environments; JAMOV and R-Studio. Using the WT strain, only the population-based cut-off was able to differentiate neutralizers from non-neutralizers beyond chance, with an area under the curve (AUC) of 0.833 (95%CI, 0.505-1.0;

Indexed as

evaluationneutralizing antibodiesSARS-CoV-2surrogate virus neutralization assayTanzania

Identifiers

PMID39866376
PMCPMC11769676

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.