Evidence map›Paper›PMID 39865106›Full record

ArticleScientific data2025

Chromosome-scale genome assembly of Korean goosegrass (Eleusine indica).

Solji Lee, Changsoo Kim

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Comparative Genomics Reveals Host-Specific Adaptation ofJournal of fungi (Basel, Switzerland) · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Solji LeeDepartment of Crop Science, Chungnam National University, Daejeon, 34134, Republic of Korea. solji2m@o.cnu.ac.kr.ORCID http://orcid.org/0000-0003-4711-5342
Changsoo KimDepartment of Crop Science, Chungnam National University, Daejeon, 34134, Republic of Korea. changsookim@cnu.ac.kr.ORCID http://orcid.org/0000-0002-3596-2934

Funding

National Research Foundation of Korea (NRF) 2022R1A2C1004127
6 · The paper itself

Abstract

Goosegrass, belonging to the genus Eleusine within the Chloridoideae subfamily, is often one of the problematic weeds with strong invasiveness, competing with crops for essential survival resources. Although a chromosome-level genome assembly of E. indica from China was published last year, the present research focuses on a population of E. indica native to South Korea. Considering the high genetic variability among wild E. indica populations, constructing multi-reference genomes from geographically distinct populations is crucial for comprehensive weed management strategies. In this study, we sequenced and assembled the whole genome using PacBio long read and Illumina short read sequencing platforms. We then combined Pore-C sequencing technology to successfully anchor 255 contigs to nine pseudochromosomes. The chromosome-level genome assembly showed a high level of completeness with a 97% score according to BUSCO analysis results. Repetitive sequences accounted for 97% of the genome assembly, and 26,836 protein-coding genes were predicted. The high-quality genome assembly of E. indica will serve as a valuable genetic resource to enhance our understanding of weed control research.

Indexed as

Chromosomes, PlantEleusineGenome, PlantRepetitive Sequences, Nucleic AcidRepublic of Korea

Identifiers

PMID39865106
PMCPMC11770105

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.