Evidence map›Paper›PMID 39863924›Full record

ArticleBiophysical journal2025

β-Barrel proteins dictate the effect of core oligosaccharide composition on outer membrane mechanics.

Dylan R Fitzmaurice, Anthony Amador, Tahj Starr, Glen M Hocky, Enrique R Rojas

Abstract read
In one paragraph

Article in Biophysical journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. OmpA controls order in the outer membrane and shares the mechanical load.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Dylan R FitzmauriceDepartment of Biology, New York University, New York, New York.
Anthony AmadorDepartment of Biology, New York University, New York, New York.
Tahj StarrDepartment of Biology, New York University, New York, New York.
Glen M HockyDepartment of Chemistry and Simons Center for Computational Physical Chemistry, New York University, New York, New York.
Enrique R RojasDepartment of Biology, New York University, New York, New York. Electronic address: rojas@nyu.edu.

Funding

Harnessing simulations to uncover molecular mechanisms of mechanosensingR35GM138312 · NIGMS · NEW YORK UNIVERSITY · PI Glen Hocky · 2020 to 2026
$3.0M
Exploring mechanical mechanisms of antibiotic resistanceR35GM143057 · NIGMS · NEW YORK UNIVERSITY · PI ROJAS, ENRIQUE · 2021 to 2025
$1.9M
NIGMS NIH HHS R35 GM138312NIGMS NIH HHS R35 GM143057
6 · The paper itself

Abstract

The outer membrane is the defining structure of Gram-negative bacteria. We previously demonstrated that it is a major load-bearing component of the cell envelope and is therefore critical to the mechanical robustness of the bacterial cell. Here, to determine the key molecules and moieties within the outer membrane that underlie its contribution to cell envelope mechanics, we measured cell-envelope stiffness across several sets of mutants with altered outer-membrane sugar content, protein content, and electric charge. To decouple outer membrane stiffness from total cell envelope stiffness, we developed a novel microfluidics-based "osmotic force-extension" assay. In tandem, we developed a method to increase throughput of microfluidics experiments by performing them on color-coded pools of mutants. We found that truncating the core oligosaccharide, deleting the β-barrel protein OmpA, or deleting lipoprotein outer membrane-cell wall linkers all had the same modest, convergent effect on total cell-envelope stiffness in Escherichia coli. However, these mutations had large, variable effects on the ability of the cell wall to transfer tension to the outer membrane during large hyperosmotic shocks. Surprisingly, altering the electric charge of lipid A had little effect on the mechanical properties of the envelope. Finally, the presence or absence of OmpA determined whether truncating the core oligosaccharide decreased or increased envelope stiffness (respectively), revealing sign epistasis between these components. Based on these data we propose a putative structural model in which the spatial interactions between lipopolysaccharides, β-barrel proteins, and phospholipids coordinately determine cell envelope stiffness.

Indexed as

Bacterial Outer MembraneBacterial Outer Membrane ProteinsEscherichia coli ProteinsMechanical PhenomenaOligosaccharidesBiomechanical PhenomenaEscherichia coliMutationBacterial Outer Membrane ProteinsEscherichia coli ProteinsOligosaccharides

Identifiers

PMID39863924
PMCPMC11897544

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.