Evidence map›Paper›PMID 39863587›Full record

ArticleNature communications2025

Exploring force-driven stochastic folding dynamics in mechano-responsive proteins and implications in phenotypic variation.

Pritam Saha, Vishavdeep Vashisht, Ojas Singh, Amin Sagar, Gaurav Kumar Bhati, Surbhi Garg, Sabyasachi Rakshit

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Pritam Saha *Department of Chemical Sciences, Indian Institute of Science Education and Research Mohali, Punjab, India.
Vishavdeep Vashisht *Department of Chemical Sciences, Indian Institute of Science Education and Research Mohali, Punjab, India.ORCID http://orcid.org/0000-0002-9367-0278
Ojas SinghDepartment of Chemical Sciences, Indian Institute of Science Education and Research Mohali, Punjab, India.ORCID http://orcid.org/0000-0002-2586-2542
Amin SagarBicycleTx Limited, Cambridge, UK.ORCID http://orcid.org/0000-0002-6207-9557
Gaurav Kumar BhatiDepartment of Chemical Sciences, Indian Institute of Science Education and Research Mohali, Punjab, India.
Surbhi GargDepartment of Chemical Sciences, Indian Institute of Science Education and Research Mohali, Punjab, India.
Sabyasachi RakshitDepartment of Chemical Sciences, Indian Institute of Science Education and Research Mohali, Punjab, India. srakshit@iisermohali.ac.in.ORCID http://orcid.org/0000-0002-8083-6857

Funding

DST | Science and Engineering Research Board (SERB) CRG/2020/003431Wellcome Trust
6 · The paper itself

Abstract

Single-point mutations are pivotal in molecular zoology, shaping functions and influencing genetic diversity and evolution. Here we study three such genetic variants of a mechano-responsive protein, cadherin-23, that uphold the structural integrity of the protein, but showcase distinct genotypes and phenotypes. The variants exhibit subtle differences in transient intra-domain interactions, which in turn affect the anti-correlated motions among the constituent β-strands. In nature, the variants experience declining functions with aging at different rates. We expose these variants to constant and oscillatory forces using magnetic tweezer, and measure variations in stochastic folding dynamics. All variants exhibit multiple microstates under force. However, the protein variant with higher number of intra-domain interactions exhibits transitions among the heterogeneous microstates for larger extent of forces and persisted longer. Conversely, the protein variant with weaker inter-strand correlations exhibits greater unfolding cooperativity and faster intrinsic folding, although its folding-energy landscape is more susceptible to distortion under tension. Our study thus deciphers the molecular mechanisms underlying the variations in force-adaptations and proposes a mechanical relation between genotype and phenotype.

Indexed as

CadherinsProtein FoldingGenotypePhenotypePoint MutationStochastic ProcessesCadherins

Identifiers

PMID39863587
PMCPMC11763006

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.