Evidence map›Paper›PMID 39862296›Full record

SynthesisGastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association2025

rs762855 single nucleotide polymorphism modulates the risk for diffuse-type gastric cancer in females: a genome-wide association study in the Korean population.

Kyungtaek Park, Cheol Min Shin, Nayoung Kim, Sungho Won, Chin-Hee Song, Jung Hun Ohn, Sejoon Lee, Ji Hyun Park, Ga-Eun Yie, Seung Joo Kang and 2 more

Abstract readMeta-Analysis
In one paragraph

Synthesis in Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kyungtaek Park *Institute of Health and Environment, Seoul National University, Seoul, Republic of Korea.
Cheol Min Shin *Department of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, Gyeonggi-Do, South Korea.
Nayoung KimDepartment of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, Gyeonggi-Do, South Korea. nakim49@snu.ac.kr.ORCID 0000-0002-9397-0406
Sungho WonInstitute of Health and Environment, Seoul National University, Seoul, Republic of Korea.
Chin-Hee SongDepartment of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, Gyeonggi-Do, South Korea.
Jung Hun OhnDepartment of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, Gyeonggi-Do, South Korea.
Sejoon LeePrecision Medicine Center, Seoul National University Bundang Hospital, Seongnam, South Korea.
Ji Hyun ParkDepartment of Internal Medicine and Liver Research Institute, Seoul National University College of Medicine, Seoul, South Korea.
Ga-Eun YieInterdisciplinary Program of Bioinformatics, Seoul National University, Seoul, Korea.
Seung Joo KangDepartment of Internal Medicine and Healthcare Research Institute, Healthcare System Gangnam Center, Seoul National University Hospital, Seoul, Korea.
Joo Sung KimDepartment of Internal Medicine and Liver Research Institute, Seoul National University College of Medicine, Seoul, South Korea.
Dong Ho LeeDepartment of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, Gyeonggi-Do, South Korea.

Funding

Seoul National University Bundang Hospital 02-2020-041Seoul National University Bundang Hospital 02-2023-0012Seoul National University Bundang Hospital 13-2019-001The National Research Foundation of Korea RS-2024-00337453The National Research Foundation of Korea RS-2024-00346850
6 · The paper itself

Abstract

backgroundIntestinal-type gastric cancer (IGC) and diffuse-type gastric cancer (DGC) exhibit different prevalence rates between sexes. While environmental factors like Helicobacter pylori infection and alcohol consumption contribute to these differences, they do not fully account for them, suggesting a role for host genetic factors.

methodsWe conducted a meta-analysis to explore associations between single nucleotide polymorphisms (SNPs) and the risk of IGC or DGC. The analysis included the SNUBH cohort (998 participants: 159 DGCs, 303 IGCs, 4,962,361 variants) and the GC_HC cohort (6,233 participants: 389 DGCs, 405 IGCs, 4,541,617 variants). Significant variants were validated in the SNUBH2_AA cohort (5,511 participants: 40 DGCs, 49 IGCs, 3,668,632 variants).

resultsThe meta-analysis identified that rs762855 (chr4:3,074,795; hg19) is significantly associated with DGC risk in females (OR [95% CI]: 1.758 [1.438-2.150], P = 3.91 × 10

conclusionThe rs762855 SNP, MSANTD1, and serum NAP levels are associated with DGC risk in Korean females.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideStomach NeoplasmsEast Asian PeopleFemaleGenome-Wide Association StudyHumansMaleMiddle AgedRepublic of KoreaRisk FactorsGastric cancerGenome-wide association studyLauren classificationSex differences

Identifiers

PMID39862296
PMCPMC11842433

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.