Evidence map›Paper›PMID 39859151›Full record

ArticleInternational journal of molecular sciences2025

Application of RNA-Based Next-Generation Sequencing Fusion Assay for Hematological Malignancies.

Fei Fei, Milhan Telatar, Vanina Tomasian, Lisa Chang, Mariel Gust, Hooi Yew, Tamerisa Dyer, Olga Danilova, Javier Arias-Stella, Raju Pillai and 6 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Fei FeiDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Milhan TelatarDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Vanina TomasianDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Lisa ChangDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Mariel GustDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Hooi YewDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Tamerisa DyerDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Olga DanilovaDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Javier Arias-StellaDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Raju PillaiDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Ibrahim AldossDepartment of Hematology & Hematopoietic Cell Transplantation, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
F Marc StewartDepartment of Hematology & Hematopoietic Cell Transplantation, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Pamela S BeckerDepartment of Hematology & Hematopoietic Cell Transplantation, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Vinod PullarkatDepartment of Hematology & Hematopoietic Cell Transplantation, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Guido MarcucciDepartment of Hematology & Hematopoietic Cell Transplantation, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.
Michelle AfkhamiDepartment of Pathology, City of Hope Comprehensive Cancer Center, Duarte, CA 91010, USA.ORCID 0000-0001-5830-6158

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recurrent fusions drive the pathogenesis of many hematological malignancies. Compared to routine cytogenetic/fluorescence in situ hybridization (FISH) studies, the RNA-based next-generation sequencing (NGS) fusion assay enables the identification of both known and novel fusions. In many cases, these recurrent fusions are crucial for diagnosis and are associated with prognosis, relapse prediction, and therapeutic options. The aim of this study is to investigate the application of the RNA-based NGS fusion assay in hematological malignancies. Our study included 3101 cases with available fusion results, and a fusion event was identified in 17.6% of cases. The discordant rate between the RNA-based NGS fusion assay and cytogenetic/FISH studies was 36.3%. Further analysis of discordant cases indicated that, compared to cytogenetic/FISH studies, the RNA-based NGS fusion assay significantly improved the identification of cryptic fusion genes, such as

Indexed as

Hematologic NeoplasmsHigh-Throughput Nucleotide SequencingOncogene Proteins, FusionAdultAgedFemaleHumansIn Situ Hybridization, FluorescenceMaleMiddle AgedSequence Analysis, RNAOncogene Proteins, Fusionfusionhematological malignanciesnext-generation sequencing (NGS)RNA

Identifiers

PMID39859151
PMCPMC11765404

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.