Evidence map›Paper›PMID 39858575›Full record

ArticleGenes2024

Relevance of Next-Generation Sequencing in the Diagnosis of Thalassemia and Hemoglobinopathies: The Experience of Four Italian Diagnostic Hubs.

Rita Selvatici, Valentina Guida, Massimo Maffei, Milena Agata Irrera, Alice Margutti, Paola Bisceglia, Massimo Mogni, Erica Melchionda, Giuseppina Stoico, Nicoletta Grifone and 10 more

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Rita SelvaticiUnit of Medical Genetics, Department of Medical Sciences, University Hospital S. Anna Ferrara, 44121 Ferrara, Italy.ORCID 0000-0002-3099-0100
Valentina GuidaDivision of Medical Genetics, Fondazione IRCCS-Casa Sollievo della Sofferenza, 71013 San Giovanni Rotondo, Italy.ORCID 0000-0003-3946-645X
Massimo MaffeiLaboratory of Human Genetics, IRCCS Istituto Giannina Gaslini, 16147 Genoa, Italy.ORCID 0000-0002-2453-9065
Milena Agata IrreraLaboratory of Medical Genetics, Clinical Pathology UOC, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, 20122 Milan, Italy.
Alice MarguttiUnit of Medical Genetics, Department of Medical Sciences, University Hospital S. Anna Ferrara, 44121 Ferrara, Italy.ORCID 0000-0002-2056-1660
Paola BiscegliaDivision of Medical Genetics, Fondazione IRCCS-Casa Sollievo della Sofferenza, 71013 San Giovanni Rotondo, Italy.ORCID 0000-0001-5684-9714
Massimo MogniLaboratory of Human Genetics, IRCCS Istituto Giannina Gaslini, 16147 Genoa, Italy.
Erica MelchiondaLaboratory of Medical Genetics, Clinical Pathology UOC, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, 20122 Milan, Italy.
Giuseppina StoicoUnit of Medical Genetics, Department of Medical Sciences, University Hospital S. Anna Ferrara, 44121 Ferrara, Italy.
Nicoletta GrifoneDivision of Medical Genetics, Fondazione IRCCS-Casa Sollievo della Sofferenza, 71013 San Giovanni Rotondo, Italy.
Laura BocciardoLaboratory of Human Genetics, IRCCS Istituto Giannina Gaslini, 16147 Genoa, Italy.
Simone SalerioLaboratory of Medical Genetics, Clinical Pathology UOC, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, 20122 Milan, Italy.ORCID 0000-0002-3092-1180
Vittoria NagliatiUnit of Medical Genetics, Department of Medical Sciences, University Hospital S. Anna Ferrara, 44121 Ferrara, Italy.
Angela AlbericoDivision of Medical Genetics, Fondazione IRCCS-Casa Sollievo della Sofferenza, 71013 San Giovanni Rotondo, Italy.
Giusy TringaliLaboratory of Human Genetics, IRCCS Istituto Giannina Gaslini, 16147 Genoa, Italy.
Cristina MellesLaboratory of Medical Genetics, Clinical Pathology UOC, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, 20122 Milan, Italy.
Alessandro De LucaDivision of Medical Genetics, Fondazione IRCCS-Casa Sollievo della Sofferenza, 71013 San Giovanni Rotondo, Italy.ORCID 0000-0002-4408-8062
Alessandra FerliniUnit of Medical Genetics, Department of Medical Sciences, University Hospital S. Anna Ferrara, 44121 Ferrara, Italy.ORCID 0000-0001-8385-9870
Domenico CovielloLaboratory of Human Genetics, IRCCS Istituto Giannina Gaslini, 16147 Genoa, Italy.ORCID 0000-0001-8440-865X
Cristina CurcioLaboratory of Medical Genetics, Clinical Pathology UOC, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, 20122 Milan, Italy.ORCID 0000-0001-9275-3242

Funding

Italian Ministry of Health (Current Research funds) UAUT2024-2043
6 · The paper itself

Abstract

Thalassemias and hemoglobinopathies are among the most common genetic diseases worldwide and have a significant impact on public health. The decreasing cost of next-generation sequencing (NGS) has quickly enabled the development of new assays that allow for the simultaneous analysis of small nucleotide variants (SNVs) and copy number variants (CNVs) as deletions/duplications of α- and β-globin genes. BACKGROUND/

objectivesThis study highlighted the efficacy and rapid identification of all types of mutations in the α- and β-globin genes, including silent variants, using the Devyser Thalassemia NGS kit. Furthermore, we report the frequency of mutations identified in a total population of 2649 individuals recruited from four Italian Medical Genetics Laboratories.

methodsAll samples were first hematologically characterized, and sequence analysis was conducted by using the Devyser Thalassemia NGS kit. All variants were also validated in an independent sample by a conventional molecular test.

resultsA total of 1789 subjects were identified with genetic variants in the globin genes, of which 966 (53.9%) had variations in the β-gene, 480 (26.8%) had variations in the α-gene; and 307 (17.1%) had variations in both α- and β-genes. Variant analysis evidenced a heterogeneous mutation spectrum enriched with variants not usually observed in the Italian population.

conclusionsThis study showed the high effectiveness and the rapid identification of all mutation types in both α- and β-globin genes, including silent variants. It should be emphasized that the NGS approach greatly shortens turnaround reporting times, overcoming the classic diagnostic flowchart which envisages multistep, subsequent, diagnostic approaches, often requiring long resolution times.

Indexed as

HemoglobinopathiesHigh-Throughput Nucleotide SequencingThalassemiaAdolescentAdultalpha-Globinsbeta-GlobinsChildDNA Copy Number VariationsFemaleHumansItalyMaleMiddle AgedMutationalpha-Globinsbeta-Globinshemoglobinopathiesnext-generation sequencing approachthalassemias

Identifiers

PMID39858575
PMCPMC11765070

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.