Evidence map›Paper›PMID 39858570›Full record

ArticleGenes2024

Exploring the Potential of Genome-Wide Hybridization Capture Enrichment for Forensic DNA Profiling of Degraded Bones.

Christian Haarkötter, Xavier Roca-Rada, María Saiz, Diana C Vinueza-Espinosa, Xiomara Gálvez, María Isabel Medina-Lozano, Daniel Díaz-Ruiz, Juan Carlos Álvarez, Bastien Llamas, Jose Antonio Lorente and 1 more

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Christian HaarkötterLaboratory of Genetic Identification & Human Rights (LABIGEN-UGR), Department of Legal Medicine, Faculty of Medicine, University of Granada, PTS Granada, Av. Investigación 11, 18016 Granada, Spain.ORCID 0000-0002-4419-4631
Xavier Roca-RadaAustralian Centre for Ancient DNA, The Environment Institute, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5000, Australia.ORCID 0000-0001-7502-6270
María SaizLaboratory of Genetic Identification & Human Rights (LABIGEN-UGR), Department of Legal Medicine, Faculty of Medicine, University of Granada, PTS Granada, Av. Investigación 11, 18016 Granada, Spain.ORCID 0000-0001-5166-7655
Diana C Vinueza-EspinosaLaboratory of Genetic Identification & Human Rights (LABIGEN-UGR), Department of Legal Medicine, Faculty of Medicine, University of Granada, PTS Granada, Av. Investigación 11, 18016 Granada, Spain.ORCID 0000-0001-9931-2108
Xiomara GálvezLaboratory of Genetic Identification & Human Rights (LABIGEN-UGR), Department of Legal Medicine, Faculty of Medicine, University of Granada, PTS Granada, Av. Investigación 11, 18016 Granada, Spain.ORCID 0009-0006-8412-3017
María Isabel Medina-LozanoLaboratory of Genetic Identification & Human Rights (LABIGEN-UGR), Department of Legal Medicine, Faculty of Medicine, University of Granada, PTS Granada, Av. Investigación 11, 18016 Granada, Spain.
Daniel Díaz-RuizLaboratory of Genetic Identification & Human Rights (LABIGEN-UGR), Department of Legal Medicine, Faculty of Medicine, University of Granada, PTS Granada, Av. Investigación 11, 18016 Granada, Spain.
Juan Carlos ÁlvarezLaboratory of Genetic Identification & Human Rights (LABIGEN-UGR), Department of Legal Medicine, Faculty of Medicine, University of Granada, PTS Granada, Av. Investigación 11, 18016 Granada, Spain.
Bastien LlamasAustralian Centre for Ancient DNA, The Environment Institute, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5000, Australia.ORCID 0000-0002-5550-9176
Jose Antonio LorenteLaboratory of Genetic Identification & Human Rights (LABIGEN-UGR), Department of Legal Medicine, Faculty of Medicine, University of Granada, PTS Granada, Av. Investigación 11, 18016 Granada, Spain.ORCID 0000-0002-9892-7386
Jeremy AustinAustralian Centre for Ancient DNA, The Environment Institute, School of Biological Sciences, The University of Adelaide, Adelaide, SA 5000, Australia.

Funding

FCT - Foundation for Science and Technology PTDC/HAR-ARQ/6273/2020Ministerio de Universidades (Spain) FPU 20/01967 and EST 23/0110
6 · The paper itself

Abstract

In many human rights and criminal contexts, skeletal remains are often the only available samples, and they present a significant challenge for forensic DNA profiling due to DNA degradation. Ancient DNA methods, particularly capture hybridization enrichment, have been proposed for dealing with severely degraded bones, given their capacity to yield results in ancient remains. BACKGROUND/

objectivesThis paper aims to test the efficacy of genome-wide capture enrichment on degraded forensic human remains compared to autosomal STRs analysis.

methodsSix highly degraded human bones from the Spanish Civil War (1936-1939) were quantified with Quantifiler

resultsThe results show that the samples behave similarly with both approaches (well-preserved samples yield good results). However, capture enrichment provides some new relevant insights, suggesting that its implementation in current NGS forensic platforms could be beneficial.

conclusionsShotgun results show that the analyzed samples exhibit the same characteristics as ancient DNA samples in terms of DNA fragmentation and molecular damage, which may enhance the value of this approach when authenticating the endogenous DNA of forensic samples.

Indexed as

Bone and BonesDNA, AncientDNA Degradation, NecroticDNA FingerprintingForensic GeneticsNucleic Acid HybridizationGenome, HumanHigh-Throughput Nucleotide SequencingHumansMicrosatellite RepeatsDNA, Ancientancient DNAcapture enrichmenthuman remainsmassively parallel sequencing (MPS)Single Nucleotide Polymorphisms (SNPs)

Identifiers

PMID39858570
PMCPMC11764906

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.