Evidence map›Paper›PMID 39856575›Full record

ArticleBMC genomics2025

Application of character based DNA barcode: a novel approach towards identification of fruit fly (Diptera: Tephritidae) species from cucurbit crops.

Ankush Mitra, Pubali Mitra, Pradosh Mahadani, Subrata Trivedi, Dhriti Banerjee, Madhusudan Das

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ankush MitraZoological Survey of India, M-Block, New Alipore, Kolkata, Pin- 700053, West Bengal, India.ORCID http://orcid.org/0009-0001-4385-7050
Pubali MitraDepartment of Zoology, City College, 102/1, Raja Rammohan Sarani, Kolkata, Pin- 700009, West Bengal, India.ORCID http://orcid.org/0009-0006-1182-4971
Pradosh MahadaniCollege of Biotechnology, Birsa Agricultural University, Ranchi, Kanke, Pin- 834006, Jharkhand, India.ORCID http://orcid.org/0000-0002-8712-5257
Subrata TrivediDepartment of Biotechnology, Haldia Institute of Technology, Knowledge City, ICARE Complex, HIT Campus, Purba Medinipur, Haldia, Pin- 721657, West Bengal, India.ORCID http://orcid.org/0009-0007-1866-6256
Dhriti BanerjeeZoological Survey of India, M-Block, New Alipore, Kolkata, Pin- 700053, West Bengal, India.ORCID http://orcid.org/0000-0002-2054-0165
Madhusudan DasDepartment of Zoology, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, Pin- 700019, West Bengal, India. mdzoo@caluniv.ac.in.ORCID http://orcid.org/0000-0003-3748-892X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe Tephritidae family, commonly referred to as true fruit flies, comprises of a substantial group within order Diptera. Numerous species within this family are major agricultural pests, with a tendency to infest a wide array of fruits and vegetables in tropical and sub- tropical regions, leading to considerable damage and consequent reductions in the market value of the crops. METHODS AND

resultsThe current study was aimed to propose a promising solution to the menace posed by fruit flies by offering rapid, accurate and reliable species identification by using character-based DNA barcode methodology. The Tephritid specimens were collected from Cucurbitaceous plants of southern parts of West Bengal, India, and a total of eight species from Tephritidae family were obtained belonging to three genera, namely Bactrocera (Macquart, 1835), Dacus (Fabricius, 1805) and Zeugodacus (Hendel, 1927). Their morphological features were meticulously studied based on available literature, along with genetic analysis based on mitochondrial COI and ND1 gene sequences. A total of 30 uniquely variable sites at nucleotide position 42,48,51,60,66,72, 105,111,144,198,207,243, 273,297,307,318,345,357, 375,378,381,387,399,400, 402,436,444,450,453 and 460 in COI gene were discerned among Tephritid species in the present study.

conclusionsThe character-based DNA barcode holds the potential to differentiate closely related species of fruit flies and morphologically look-a-like ones. The novel method will be very significant in terms of rapid, precise and reliable species identification and might be extremely essential for early detection during pest outbreaks by facilitating timely intervention strategies to mitigate crop damage.

Indexed as

Crops, AgriculturalCucurbitaceaeDNA Barcoding, TaxonomicTephritidaeAnimalsElectron Transport Complex IVPhylogenySpecies SpecificityElectron Transport Complex IVCOICucurbitaceaeDNA barcodeTephritidae

Identifiers

PMID39856575
PMCPMC11761802

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.