Evidence map›Paper›PMID 39855590›Full record

ArticleDevelopmental biology2025

Shh signaling directs dorsal ventral patterning in the regenerating X. tropicalis spinal cord.

Avery Angell Swearer, Samuel Perkowski, Andrea Wills

Abstract read
In one paragraph

Article in Developmental biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Avery Angell SwearerDepartment of Biochemistry, University of Washington School of Medicine, USA; Program in Molecular and Cellular Biology, University of Washington, USA.
Samuel PerkowskiDepartment of Biochemistry, University of Washington School of Medicine, USA.
Andrea WillsDepartment of Biochemistry, University of Washington School of Medicine, USA. Electronic address: aewills@uw.edu.

Funding

Training in Cellular & Molecular BiologyT32GM136534 · NIGMS · UNIVERSITY OF WASHINGTON · PI Andrew Atwell Oberst, LARRY S ZWEIFEL · 2021 to 2026
$5.8M
Transcriptional regulatory mechanisms of vertebrate regenerationR01NS099124 · NINDS · UNIVERSITY OF WASHINGTON · PI Andrea Elizabeth Wills · 2017 to 2026
$3.3M
NIGMS NIH HHS T32 GM136534NINDS NIH HHS R01 NS099124
6 · The paper itself

Abstract

Tissue development and regeneration rely on the deployment of embryonic signals to drive progenitor activity and thus generate complex cell diversity and organization. One such signal is Sonic Hedgehog (Shh), which establishes the dorsal-ventral (D/V) axis of the spinal cord during embryogenesis. However, the existence of this D/V axis and its dependence on Shh signaling during regeneration varies by species. Here we investigate the function of Shh signaling in patterning the D/V axis during spinal cord regeneration in Xenopus tropicalis tadpoles. We find that neural progenitor markers Msx1/2, Nkx6.1, and Nkx2.2 are confined to dorsal, intermediate and ventral spatial domains, respectively, in both the uninjured and regenerating spinal cord. These domains are altered by perturbation of Shh signaling. Additionally, we find that these D/V domains are more sensitive to Shh perturbation during regeneration than uninjured tissue. The renewed sensitivity of these neural progenitor cells to Shh signals represents a regeneration specific response and raises questions about how responsiveness to developmental patterning cues is regulated in mature and regenerating tissues.

Indexed as

Body PatterningHedgehog ProteinsSignal TransductionSpinal CordSpinal Cord RegenerationXenopusXenopus ProteinsAnimalsGene Expression Regulation, DevelopmentalHomeobox Protein Nkx-2.2Homeodomain ProteinsLarvaNeural Stem CellsTranscription FactorsHedgehog ProteinsHomeobox Protein Nkx-2.2Homeodomain ProteinsShh protein, XenopusTranscription FactorsXenopus Proteins

Identifiers

PMID39855590
PMCPMC12707972

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.