Evidence map›Paper›PMID 39853960›Full record

ArticleThe plant genome2025

A novel quantitative trait locus for barley yellow dwarf virus resistance and kernel traits on chromosome 2D of a wheat cultivar Jagger.

Ruolin Bian, Na Liu, Yuzhou Xu, Zhenqi Su, Lingling Chai, Amy Bernardo, Paul St Amand, Jessica Rupp, Michael Pumphrey, Allan Fritz and 3 more

Abstract read
In one paragraph

Article in The plant genome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Advances in mutant characterization for detecting causal mutations in crop plants.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ruolin BianDepartment of Agronomy, Kansas State University, Manhattan, Kansas, USA.
Na LiuCollege of Life Sciences, Henan Agricultural University, Zhengzhou, China.
Yuzhou XuDepartment of Agronomy, Kansas State University, Manhattan, Kansas, USA.ORCID https://orcid.org/0000-0002-0522-6928
Zhenqi SuDepartment of Agronomy, Kansas State University, Manhattan, Kansas, USA.
Lingling ChaiDepartment of Agronomy, Kansas State University, Manhattan, Kansas, USA.
Amy BernardoUSDA-ARS, Hard Winter Wheat Genetics Research Unit, Manhattan, Kansas, USA.
Paul St AmandUSDA-ARS, Hard Winter Wheat Genetics Research Unit, Manhattan, Kansas, USA.
Jessica RuppDepartment of Plant Pathology, Kansas State University, Manhattan, Kansas, USA.
Michael PumphreyDepartment of Crop and Soil Sciences, Washington State University, Pullman, Washington, USA.
Allan FritzDepartment of Agronomy, Kansas State University, Manhattan, Kansas, USA.
Guorong ZhangDepartment of Agronomy, Kansas State University, Manhattan, Kansas, USA.
Katherine W JordanUSDA-ARS, Hard Winter Wheat Genetics Research Unit, Manhattan, Kansas, USA.ORCID https://orcid.org/0000-0003-1323-6824
Guihua BaiDepartment of Agronomy, Kansas State University, Manhattan, Kansas, USA.ORCID https://orcid.org/0000-0002-1194-319X

Funding

USDA, National Institute of Food and Agriculture 2022-68013-36439
6 · The paper itself

Abstract

Barley yellow dwarf (BYD) is one of the most serious viral diseases in cereal crops worldwide. Identification of quantitative trait loci (QTLs) underlining wheat resistance to barley yellow dwarf virus (BYDV) is essential for breeding BYDV-tolerant wheat cultivars. In this study, a recombinant inbred line (RIL) population was developed from the cross between Jagger (PI 593688) and a Jagger mutant (JagMut1095). A linkage map of 3106 cM consisting of 21 wheat chromosomes was developed using 1003 unique single nucleotide polymorphisms (SNPs) from the RIL population and was used to identify QTLs for BYDV resistance and yield-related traits, including 1000-kernel weight (TKW), kernel area (KA), kernel width (KW), and kernel length (KL). QByd.hwwg-2DL, a QTL on chromosome arm 2DL for BYDV resistance, was consistently identified in three field experiments and explained 11.6%-44.5% of the phenotypic variation. For yield-related traits, six major and repeatable QTLs were identified on 1AS (QKa.hwwg-1AS), 2DL (QTkw.hwwg-2DL, QKa.hwwg-2DL, QKw.hwwg-2DL, and QKl.hwwg-2DL), and 5AL (QKw.hwwg-5AL). The major QTLs on chromosome 2DL for TKW, KA, KW, and KL were mapped between 621 and 643 Mb, overlapping with QByd.hwwg-2DL with all the favorable alleles from Jagger. This study reports the first native BYDV resistance QTL (QByd.hwwg-2DL) originating from common wheat and tightly linked markers to the QTL for improvement of wheat BYDV resistance in wheat breeding.

Indexed as

Chromosomes, PlantDisease ResistanceLuteovirusPlant DiseasesQuantitative Trait LociTriticumChromosome MappingPhenotypePolymorphism, Single Nucleotide

Identifiers

PMID39853960
PMCPMC11760652

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.