Evidence map›Paper›PMID 39852510›Full record

ReviewMarine drugs2024

Exploring the Structural Diversity and Biotechnological Potential of the Rhodophyte Phycolectome.

Éllen F Rodrigues, Flavia Alves Verza, Felipe Garcia Nishimura, Renê Oliveira Beleboni, Cedric Hermans, Kaat Janssens, Maarten Lieven De Mol, Paco Hulpiau, Mozart Marins

Abstract readReview
In one paragraph

Review in Marine drugs, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Éllen F RodriguesPostgraduate Program in Environmental Technology, University of Ribeirão Preto/UNAERP, Ribeirão Preto 14096-900, SP, Brazil.ORCID 0000-0002-1289-9688
Flavia Alves VerzaBiotechnology Unit, University of Ribeirão Preto/UNAERP, Ribeirão Preto 14096-900, SP, Brazil.
Felipe Garcia NishimuraBiotechnology Unit, University of Ribeirão Preto/UNAERP, Ribeirão Preto 14096-900, SP, Brazil.ORCID 0000-0001-7177-0043
Renê Oliveira BeleboniBiotechnology Unit, University of Ribeirão Preto/UNAERP, Ribeirão Preto 14096-900, SP, Brazil.ORCID 0000-0001-8407-8865
Cedric HermansBioinformatics Knowledge Center (BiKC), Cluster Life Sciences, Campus Brugge Station, Howest University of Applied Sciences, Spoorwegstraat 4, 8200 Brugge, Belgium.ORCID 0000-0002-9310-1876
Kaat JanssensBioinformatics Knowledge Center (BiKC), Cluster Life Sciences, Campus Brugge Station, Howest University of Applied Sciences, Spoorwegstraat 4, 8200 Brugge, Belgium.
Maarten Lieven De MolCentre for Industrial Biotechnology and Biocatalysis (InBio.be), Department of Biotechnology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent, Belgium.ORCID 0000-0002-9788-8688
Paco HulpiauBioinformatics Knowledge Center (BiKC), Cluster Life Sciences, Campus Brugge Station, Howest University of Applied Sciences, Spoorwegstraat 4, 8200 Brugge, Belgium.ORCID 0000-0002-6692-2150
Mozart MarinsBiotechnology Unit, University of Ribeirão Preto/UNAERP, Ribeirão Preto 14096-900, SP, Brazil.ORCID 0000-0001-7389-4023

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lectins are non-covalent glycan-binding proteins found in all living organisms, binding specifically to carbohydrates through glycan-binding domains. Lectins have various biological functions, including cell signaling, molecular recognition, and innate immune responses, which play multiple roles in the physiological and developmental processes of organisms. Moreover, their diversity enables biotechnological exploration as biomarkers, biosensors, drug-delivery platforms, and lead molecules for anticancer, antidiabetic, and antimicrobial drugs. Lectins from Rhodophytes (red seaweed) have been extensively reported and characterized for their unique molecular structures, carbohydrate-binding specificities, and important biological activities. The increasing number of sequenced Rhodophyte genomes offers the opportunity to further study this rich source of lectins, potentially uncovering new ones with properties significantly different from their terrestrial plant counterparts, thus opening new biotechnological applications. We compiled literature data and conducted an in-depth analysis of the phycolectomes from all Rhodophyta genomes available in NCBI datasets. Using Hidden Markov Models capable of identifying lectin-type domains, we found at least six different types of lectin domains present in Rhodophytes, demonstrating their potential in identifying new lectins. This review integrates a computational analysis of the Rhodophyte phycolectome with existing information on red algae lectins and their biotechnological potential.

Indexed as

LectinsRhodophytaBiotechnologyLectinslectinsphycolectomered seaweedRhodophyta

Identifiers

PMID39852510
PMCPMC11766507

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.