Evidence map›Paper›PMID 39846779›Full record

ArticleThe Journal of antimicrobial chemotherapy2025

Monitoring molecular markers associated with antimalarial drug resistance in south-east Senegal from 2021 to 2023.

Alioune Wade, Seynabou D Sene, Emanuelle Caspar, Fatoumata Diallo, Lucien Platon, Lucas Thiebaut, Mariama N Pouye, Aboubacar Ba, Laty Gaye Thiam, Magal Fall and 9 more

Abstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Alioune WadeInstitut Pasteur de Dakar, Immunophysiopathology and Infectious Diseases Department, G4-Malaria Experimental Genetic Approaches and Vaccines Unit, Dakar, Senegal.
Seynabou D SeneInstitut Pasteur de Dakar, Immunophysiopathology and Infectious Diseases Department, G4-Malaria Experimental Genetic Approaches and Vaccines Unit, Dakar, Senegal.
Emanuelle CasparMalaria Genetics and Resistance Team (MEGATEAM), UR 3073-Pathogens Host Arthropods Vectors Interactions, Université de Strasbourg, Strasbourg F-67000, France.
Fatoumata DialloInstitut Pasteur de Dakar, Immunophysiopathology and Infectious Diseases Department, G4-Malaria Experimental Genetic Approaches and Vaccines Unit, Dakar, Senegal.
Lucien PlatonMalaria Genetics and Resistance Team (MEGATEAM), UR 3073-Pathogens Host Arthropods Vectors Interactions, Université de Strasbourg, Strasbourg F-67000, France.
Lucas ThiebautMalaria Genetics and Resistance Team (MEGATEAM), UR 3073-Pathogens Host Arthropods Vectors Interactions, Université de Strasbourg, Strasbourg F-67000, France.
Mariama N PouyeInstitut Pasteur de Dakar, Immunophysiopathology and Infectious Diseases Department, G4-Malaria Experimental Genetic Approaches and Vaccines Unit, Dakar, Senegal.
Aboubacar BaInstitut Pasteur de Dakar, Immunophysiopathology and Infectious Diseases Department, G4-Malaria Experimental Genetic Approaches and Vaccines Unit, Dakar, Senegal.ORCID 0000-0003-2351-2394
Laty Gaye ThiamInstitut Pasteur de Dakar, Immunophysiopathology and Infectious Diseases Department, G4-Malaria Experimental Genetic Approaches and Vaccines Unit, Dakar, Senegal.
Magal FallInstitut Pasteur de Dakar, Immunophysiopathology and Infectious Diseases Department, G4-Malaria Experimental Genetic Approaches and Vaccines Unit, Dakar, Senegal.
Bacary Djilocalisse SadioVirology Department, Institut Pasteur de Dakar, Arboviruses and Hemorrhagic Fever Viruses Unit, Dakar, Senegal.
Ife DesamoursDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA.
Noemi GuerraDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA.
Kelly HagadornDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA.
Alfred Amambua-NgwaLondon School of Hygiene and Tropical Medicine, MRC Unit the Gambia Department, GM-Gambia Clinical Services, Banjul, The Gambia.
Amy K BeiInstitut Pasteur de Dakar, Immunophysiopathology and Infectious Diseases Department, G4-Malaria Experimental Genetic Approaches and Vaccines Unit, Dakar, Senegal.
Ines Vigan-WomasInstitut Pasteur de Dakar, Immunophysiopathology and Infectious Diseases Department, Dakar, Senegal.ORCID 0000-0001-7848-9297
Didier MénardMalaria Genetics and Resistance Team (MEGATEAM), UR 3073-Pathogens Host Arthropods Vectors Interactions, Université de Strasbourg, Strasbourg F-67000, France.ORCID 0000-0003-1357-4495
Alassane MbengueInstitut Pasteur de Dakar, Immunophysiopathology and Infectious Diseases Department, G4-Malaria Experimental Genetic Approaches and Vaccines Unit, Dakar, Senegal.

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Evaluating the Functional Impact of Genetic Diversity on Malaria Vaccine CandidatesR01AI168238 · NIAID · YALE UNIVERSITY · PI Amy Kristine Bei · 2022 to 2026
$3.5M
Employing genetic and genomic surveillance to reveal mechanisms of malaria parasite persistenceK01TW010496 · FIC · YALE UNIVERSITY · PI BEI, AMY KRISTINE · 2016 to 2021
$754k
Cancer Research UK, the UK Medical Research Council FC1001647Crick African NetworkCrick African Network (CANEDTCP fund Emerging Genomic Selection and Antimalarial Tolerance in AfricanFIC NIH HHS K01 TW010496FIC NIH HHS R01 AI168238FRM EQU202403018026G4 group funding G45267Institut Pasteur de Paris, the Agence Universitaire de la Francophonie (AUF C1001647National Institute of Allergy and Infectious Diseases, of the National Institutes of HealthNCATS NIH HHS UL1 TR001863NIAID NIH HHS R01 AI168238Suez FoundationUK's Global Challenges Research Fund MR/P028071/1Welcome Trust FC1001647
6 · The paper itself

Abstract

backgroundSince 2006, artemisinin-based combination therapies (ACTs) have been introduced in Senegal in response to chloroquine resistance (CQ-R) and have shown high efficacy against Plasmodium falciparum. However, the detection of the PfKelch13R515K mutation in Kaolack, which confers artemisinin resistance in vitro, highlights the urgency of strengthening antimalarial drug surveillance to achieve malaria elimination by 2030.

objectiveTo assess the proportion of P. falciparum parasites carrying molecular signatures associated with antimalarial resistance (PfKelch13, Pfmdr1, Pfcrt, dhfr and dhps) in isolates collected at Kédougou using multiplex amplicon deep sequencing.

methodsVenous blood samples were collected from patients diagnosed with P. falciparum infection over a 3-year period (2021, 2022 and 2023). Parasite DNA was extracted, and multiplex amplicon sequencing was used to investigate gene polymorphisms.

resultsAnalysis of PfKelch13 did not reveal any non-synonymous mutations. Pfcrt mutations were present in 45% of the samples, mainly K76T (44%) and I356T (36%). The dominant Pfmdr-1 allele was Y184F (62%). The sextuple mutant 51I/59R/108N + 436A/437G/613S dhfr/dhps was observed in 10% of the samples.

conclusionThe absence of PfKelch13 mutants suggests that ACT efficacy remains uncompromised, although clinical outcome studies are required to confirm this. Analysis of Pfcrt and Pfmdr-1 shows that CQ-R alleles, probably from previous CQ use, are slowly decreasing. Likewise, the detection of the dhfr/dhps sextuple mutant highlights the need to monitor sulfadoxine-pyrimethamine resistance and the emergence of 581G. There is therefore a need for continued antimalarial resistance surveillance in Senegal.

Indexed as

AntimalarialsDrug ResistanceMalaria, FalciparumPlasmodium falciparumArtemisininsATP-Binding Cassette, Sub-Family C ProteinsDNA, ProtozoanDrug CombinationsFemaleHigh-Throughput Nucleotide SequencingHumansMutationProtozoan ProteinsSenegalAntimalarialsartemisininArtemisininsATP-Binding Cassette, Sub-Family C ProteinsDNA, ProtozoanDrug CombinationsProtozoan Proteins

Identifiers

PMID39846779
PMCPMC11879165

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.