Evidence map›Paper›PMID 39845926›Full record

ArticleIJID regions2025

SARS-CoV-2 Omicron XBB infections boost cross-variant neutralizing antibodies, potentially explaining the observed delay of the JN.1 wave in some Brazilian regions.

Luis Fernando Lopez Tort, Mia Ferreira de Araújo, Ighor Arantes, Jéssica Scc Martins, Marcelo Gomes, Felipe Cotrim de Carvalho, Walquiria Aparecida Ferreira de Almeida, Braulia Costa Caetano, Luciana R Appolinario, Elisa Calvalcante Pereira and 10 more

Abstract read
In one paragraph

Article in IJID regions, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Luis Fernando Lopez TortLaboratory of Respiratory Viruses, Exanthematous and Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Mia Ferreira de AraújoLaboratory of Respiratory Viruses, Exanthematous and Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Ighor ArantesLaboratory of Arbovirus and Hemorragic Viruses, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Jéssica Scc MartinsLaboratory of Respiratory Viruses, Exanthematous and Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Marcelo GomesFiocruz, Presidency, Scientific Computing Program, Group of Analytical Methods in Epidemiological Surveillance, Rio de Janeiro, Brazil.
Felipe Cotrim de CarvalhoDepartment of Transmissible Diseases, General Coordination of Surveillance of Covid-19, Influenza and Other Respiratory Viruses, Secretariat of Health and Environmental Surveillance, Ministry of Health, Brasília, Brazil.
Walquiria Aparecida Ferreira de AlmeidaDepartment of Transmissible Diseases, General Coordination of Surveillance of Covid-19, Influenza and Other Respiratory Viruses, Secretariat of Health and Environmental Surveillance, Ministry of Health, Brasília, Brazil.
Braulia Costa CaetanoLaboratory of Respiratory Viruses, Exanthematous and Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Luciana R AppolinarioLaboratory of Respiratory Viruses, Exanthematous and Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Elisa Calvalcante PereiraLaboratory of Respiratory Viruses, Exanthematous and Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Jéssica CarvalhoLaboratory of Respiratory Viruses, Exanthematous and Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Fábio MiyajimaAnalytical Competence Molecular Epidemiology Laboratory (ACME), Fundação Oswaldo Cruz (FIOCRUZ), Fortaleza, Ceará, Brazil.
Gabriel Luz WallauDepartment of Entomology & Bioinformatics Center, Aggeu Magalhães Institute, FIOCRUZ, S/N Professor Moraes Rego Ave., Pernambuco, Brazil.
Felipe Gomes NavecaLaboratory of Arbovirus and Hemorragic Viruses, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Pedro AlvesLaboratory of Immunology of Viral diseases, René Rachou Institute, Minas Gerais, Brazil.
Otávio EspíndolaLaboratory of Clinical Research for Acute Febrile Illnesses, Evandro Chagas National Institute of Infectious Diseases, Rio de Janeiro, Brazil.
Patricia BrasilLaboratory of Clinical Research for Acute Febrile Illnesses, Evandro Chagas National Institute of Infectious Diseases, Rio de Janeiro, Brazil.
Paola Cristina ResendeLaboratory of Respiratory Viruses, Exanthematous and Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Gonzalo BelloLaboratory of Arbovirus and Hemorragic Viruses, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.
Marilda Mendonça SiqueiraLaboratory of Respiratory Viruses, Exanthematous and Enteroviruses and Viral Emergencies, Oswaldo Cruz Institute, Rio de Janeiro, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methods: We analyzed the evolution of SARS-CoV-2 lineages and severe acute respiratory infection (SARI) cases in Brazil between July 2023 and March 2024. We evaluated the cross-reactive NAb responses to the JN.1 variant in a cohort of convalescent Brazilian patients before and after infection with XBB.1* lineages. Results: JN.1 replaced XBB with similar temporal dynamics across all country regions, although its epidemiologic impact varied between locations. The southeastern, southern, and central-western regions experienced a brief XBB wave around October 2023, shortly before the introduction of JN.1, without any immediate upsurge of SARI cases during viral lineage replacement. By contrast, the northeastern and northern regions did not experience an XBB wave in the latter half of 2023 and displayed a rapid surge in SARI cases driven by the emergence of the JN.1. We found that recent XBB infections in the Brazilian population significantly boosted cross-reactive NAb levels against JN.1. Conclusion: The XBB wave observed in the second half of 2023 in some Brazilian states likely acted as a booster for population immunity, providing short-term protection against JN.1 infections and delaying the rise of SARI cases in certain regions of the country.

Indexed as

Brazillineages evolutionNeutralizing AntibodiesSARS-CoV-2Severe Acute Respiratory Infection CasesXBB and JN.1 variants

Identifiers

PMID39845926
PMCPMC11750507

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.