Evidence map›Paper›PMID 39844875›Full record

ArticleExperimental biology and medicine (Maywood, N.J.)2024

Whole blood transcriptome profile identifies motor neurone disease RNA biomarker signatures.

Sulev Kõks, Karin Rallmann, Mari Muldmaa, Jack Price, Abigail L Pfaff, Pille Taba

Abstract read
In one paragraph

Article in Experimental biology and medicine (Maywood, N.J.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sulev KõksCentre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Perth, WA, Australia.
Karin RallmannDepartment of Neurology, Tartu University Hospital, Tartu, Estonia.
Mari MuldmaaDepartment of Neurology, North Estonia Medical Center, Tallinn, Estonia.
Jack PricePerron Institute for Neurological and Translational Science, Perth, WA, Australia.
Abigail L PfaffCentre for Molecular Medicine and Innovative Therapeutics, Murdoch University, Perth, WA, Australia.
Pille TabaInstitute of Clinical Medicine, University Tartu, Tartu, Estonia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Blood-based biomarkers for motor neuron disease are needed for better diagnosis, progression prediction, and clinical trial monitoring. We used whole blood-derived total RNA and performed whole transcriptome analysis to compare the gene expression profiles in (motor neurone disease) MND patients to the control subjects. We compared 42 MND patients to 42 aged and sex-matched healthy controls and described the whole transcriptome profile characteristic for MND. In addition to the formal differential analysis, we performed functional annotation of the genomics data and identified the molecular pathways that are differentially regulated in MND patients. We identified 12,972 genes differentially expressed in the blood of MND patients compared to age and sex-matched controls. Functional genomic annotation identified activation of the pathways related to neurodegeneration, RNA transcription, RNA splicing and extracellular matrix reorganisation. Blood-based whole transcriptomic analysis can reliably differentiate MND patients from controls and can provide useful information for the clinical management of the disease and clinical trials.

Indexed as

BiomarkersGene Expression ProfilingMotor Neuron DiseaseRNATranscriptomeAdultAgedCase-Control StudiesFemaleHumansMaleMiddle AgedBiomarkersRNAamyotrophic lateral sclerosisgene expression profilingmotor neuron diseaseRNA-seqwhole transcriptome

Identifiers

PMID39844875
PMCPMC11750576

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.