Evidence map›Paper›PMID 39841376›Full record

ArticleFolia microbiologica2025

Boosting the catalytic efficiency of UGT51 for efficient production of rare ginsenoside Rh2.

Mohamed Yassin Ali, Mohnad Abdalla, Ahmed F Roumia, Mohamed A Tammam, Mohamed Fawzy Ramadan, Mohmmed Abdelssalam Hassan Edrees, Atul Kabra, Daochen Zhu

Abstract read
PubMed Publisher
In one paragraph

Article in Folia microbiologica, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mohamed Yassin AliBiofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang, 212013, China.
Mohnad AbdallaPediatric Research Institute, Children's Hospital Affiliated to Shandong University, Jinan, Shandong, 250022, PR China.
Ahmed F RoumiaDepartment of Agricultural Biochemistry, Faculty of Agriculture, Menoufia University, Shibin El-Kom, 32514, Egypt.ORCID http://orcid.org/0000-0003-0977-0995
Mohamed A TammamDepartment of Biochemistry, Faculty of Agriculture, Fayoum University, Fayoum, 63514, Egypt.
Mohamed Fawzy RamadanDepartment of Clinical Nutrition, Faculty of Applied Medical Sciences, Umm Al-Qura University, Makkah, Saudi Arabia. mfhassanien@uqu.edu.sa.ORCID http://orcid.org/0000-0002-5431-8503
Mohmmed Abdelssalam Hassan EdreesDepartment of Immunology, Faculty of Medical Laboratory Science, Omdurman Islamic University, Omdurman, Sudan.
Atul KabraUniversity Institute of Pharma Science, Chandigarh University, Chandigarh, Punjab, India.
Daochen ZhuBiofuels Institute, School of Emergency Management, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang, 212013, China. dczhucn@ujs.edu.cn.

Funding

National Key R&D Program of China 2023YFC3403600
6 · The paper itself

Abstract

Ginsenoside Rh2(S) is well-known for its therapeutic potential against diverse conditions, including some cancers, inflammation, and diabetes. The enzymatic activity of uridine diphosphate glycosyltransferase 51 (UGT51) from Saccharomyces cerevisiae plays a pivotal role in the glycosylation process between UDP-glucose (donor) and protopanaxadiol (acceptor), to form ginsenoside Rh2. However, the catalytic efficiency of the UGT51 has remained a challenging task. To this end, we employed site-directed mutagenesis on UGT51 to improve its catalytic efficiency for enhanced production of ginsenoside Rh2. The mutated structure, featuring four key mutations (E805A, S998A, R1031A, and L1032A), exhibited heightened stability, binding affinity, and active site accessibility for protopanaxadiol (PPD) compared to the wild type. Under in vitro conditions, three mutants (E805A, R1031A, and L1032A) demonstrated 10%, 58%, and 65% higher enzymatic activities compared to the wild strain. Notably, the double mutant R1031A/L1032A exhibited an 85% increase in activity. Employing a fed-batch technology with PPD as the substrate yielded a Rh2 production of 4.663 g/L. The molecular dynamics (MD) simulations were employed to investigate the movements and dynamic dynamics of UGT51 mutations and PPD complexes. The root mean square deviation (RMSD) analysis revealed substantial alterations in structural conformation, particularly in the R1031A/L1032A mutations, correlating with boosted catalytic efficiency. Furthermore, the root mean square fluctuation (RMSF) simulation study aligned with both the RMSD and the solvent-accessible surface area (SASA) analyses. The computationally guided site-directed mutagenesis approach holds promise for extending its application to the development of commercially significant enzymes.

Indexed as

GinsenosidesGlycosyltransferasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCatalytic DomainGlycosylationMolecular Dynamics SimulationMutagenesis, Site-DirectedSapogeninsginsenoside Rh2GinsenosidesGlycosyltransferasesprotopanaxadiolSaccharomyces cerevisiae ProteinsSapogeninsFed-batch technologyGinsenoside Rh2MD simulationsSite-directed mutagenesisUridine diphosphate glycosyltransferase 51

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.