Evidence map›Paper›PMID 39841168›Full record

ArticleEuropean biophysics journal : EBJ2025

On-the-fly resolution enhancement in X-ray protein crystallography using electric field.

Krishna Prasad Khakurel, Michal Nemergut, Purbaj Pant, Martin Savko, Jakob Andreasson, Gabriel Žoldák

Abstract read
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Article in European biophysics journal : EBJ, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Krishna Prasad KhakurelELI Beamlines Facility, The Extreme Light Infrastructure ERIC, Za Radnicí 835, 25241, Dolní Břežany, Czech Republic. Krishna.Khakurel@eli-beams.eu.ORCID http://orcid.org/0000-0001-5974-8302
Michal NemergutCenter for Interdisciplinary Biosciences, Technology and Innovation Park, P. J. Šafárik University, Košice, Slovakia.
Purbaj PantELI Beamlines Facility, The Extreme Light Infrastructure ERIC, Za Radnicí 835, 25241, Dolní Břežany, Czech Republic.
Martin SavkoSoleil Synchrotron, Saint-Aubin, France.
Jakob AndreassonELI Beamlines Facility, The Extreme Light Infrastructure ERIC, Za Radnicí 835, 25241, Dolní Břežany, Czech Republic.
Gabriel ŽoldákFaculty of Sciences, P. J. Šafárik University, Košice, Slovakia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

X-ray crystallography has tremendously served structural biology by routinely providing high-resolution 3D structures of macromolecules. The extent of information encoded in the X-ray crystallography is proportional to which resolution the crystals diffract and the structure can be refined to. Therefore, there is a continuous effort to obtain high-quality crystals, especially for those proteins, which are considered difficult to crystallize into high-quality protein crystals of suitable sizes for X-ray crystallography. Efforts in enhancing the resolution in X-ray crystallography have also been made by optimizing crystallization protocols using external stimuli such as an electric field and magnetic field during the crystallization. Here, we present the feasibility of on-the-fly post-crystallization resolution enhancement of the protein crystal diffraction by applying a high-voltage electric field. The electric field between 2 and 11 kV/cm, which was applied after mounting the crystals in the beamline, resulted in the enhancement of the resolution. The crystal diffraction quality improved progressively with the exposure time. Moreover, we also find that upto defined electric field threshold, the protein structure remains largely unperturbed, a conclusion further supported by molecular dynamics simulations.

Indexed as

ElectricityProteinsCrystallography, X-RayMolecular Dynamics SimulationProteinsExternal electric fieldMacromolecular crystalsResolution enhancement

Identifiers

PMID39841168
PMCPMC11880155

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.