Evidence map›Paper›PMID 39838688›Full record

ArticleCurrent medicinal chemistry2025

Exploring PANoptosis Related Novel Diagnostic Biomarkers and Potential Drugs for Sarcopenia based on Machine Learning and Experimental Validation.

Zhibo Deng, Chao Song, Rongsheng Zhang, Yu Xiu, Linhai Yang, Hanhao Dai, Jun Luo, Jie Xu

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Article in Current medicinal chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zhibo DengFujian Provincial Hospital, Fuzhou University Affiliated Provincial Hospital, Shengli Clinical Medical College of Fujian Medical University, Fuzhou, China.
Chao SongFujian Provincial Hospital, Fuzhou University Affiliated Provincial Hospital, Shengli Clinical Medical College of Fujian Medical University, Fuzhou, China.
Rongsheng ZhangFujian Provincial Hospital, Fuzhou University Affiliated Provincial Hospital, Shengli Clinical Medical College of Fujian Medical University, Fuzhou, China.
Yu XiuCollege of Traditional Chinese Medicine, Fujian University of Traditional Chinese Medicine, Fuzhou, China.
Linhai YangFujian Provincial Hospital, Fuzhou University Affiliated Provincial Hospital, Shengli Clinical Medical College of Fujian Medical University, Fuzhou, China.
Hanhao DaiFujian Provincial Hospital, Fuzhou University Affiliated Provincial Hospital, Shengli Clinical Medical College of Fujian Medical University, Fuzhou, China.
Jun LuoFujian Provincial Hospital, Fuzhou University Affiliated Provincial Hospital, Shengli Clinical Medical College of Fujian Medical University, Fuzhou, China.
Jie XuFujian Provincial Hospital, Fuzhou University Affiliated Provincial Hospital, Shengli Clinical Medical College of Fujian Medical University, Fuzhou, China.

Funding

Firestone Research Project of Fujian Provincial Hospital 2020029HSJJFujian Provincial Natural Science Foundation Projects 2020J05270, 2022J011016, 2021J01376Joint Fund Project for Science Research and Technology Innovation 2023Y96010220Major Scientific Research Project of Fujian Province 2021ZD01003Medical Innovation Project of Fujian Provincial Health Department 2020QNA009Orthopaedics (National Clinical Key Specialty) 2023152Startup Fund for Scientific Research of Fujian Medical University 2023QH2041
6 · The paper itself

Abstract

backgroundSarcopenia, an aseptic chronic inflammatory disease, is a complex and debilitating disease characterized by the progressive degeneration of skeletal muscle. PANoptosis, a novel proinflammatory programmed cell death pathway, has been linked to various diseases. However, the precise role of PANoptosis-related features in sarcopenia remains uncertain.

methodsAccording to the intersection of differentially expressed genes (DEGs) in the sarcopenia dataset GSE167186 and the PANoptosis gene set, we classified patients into PANoptosis-related subtypes (PANRS) using consensus clustering. The DEGs of PANRS were intersected with weighted gene co-expression network analysis (WGCNA). Protein- protein interaction network and cytoHubba algorithms were employed to further identify potential genes related to PANoptosis. The most characteristic genes were selected using LASSO regression and validated by ROC curve analysis, followed by relevant immune infiltration analysis. Additionally, small-molecule drug screening was performed using Cmap. The relative expression levels of hub genes in sarcopenia were confirmed by PCR. Finally, single-cell analysis and GSEA were used to examine the distribution and function of hub genes.

resultsThirty-five candidate genes were identified through WGCNA and PANRS. Machine learning and ROC curve analysis revealed three core genes:

conclusionIn this study, the hub genes

Indexed as

BiomarkersSarcopeniaMachine LearningProtein Interaction MapsBiomarkersbiomarkerdrug predictionmachine learningmetabolism.PANoptosisSarcopenia

Identifiers

PMID39838688

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