Evidence map›Paper›PMID 39832907›Full record

ArticleLupus science & medicine2025

Unravelling the TCRβ repertoire: a key to unlocking the immunopathogenesis and precision medicine in SLE.

Li Zeng, Lijing Yang, Yichen Zhang, Tianzuo Lan, Yang An, Pengming He, Xueping Wen, Shaoping Deng, Zhixin Zhang, Jian Liu and 1 more

Abstract read
In one paragraph

Article in Lupus science & medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Li ZengDepartment of Neurology, Sichuan Provincial People's Hospital, University of Electronic Science and Technology of China, Chengdu, China.
Lijing YangSchool of Medicine, University of Electronic Science and Technology of China, Chengdu, China.
Yichen ZhangSchool of Medicine, University of Electronic Science and Technology of China, Chengdu, China.
Tianzuo LanDepartment of Rheumatology, The First People's Hospital of Guiyang, Guiyang, Guizhou Province, China.
Yang AnSecond Affiliated Hospital, Guizhou University of Traditional Chinese Medicine, Guiyang, Guizhou Province, China.
Pengming HeDepartment of Technology, Chengdu ExAb Biotechnology, Ltd, Chengdu, China.
Xueping WenDepartment of Technology, Chengdu ExAb Biotechnology, Ltd, Chengdu, China.
Shaoping DengSchool of Medicine, University of Electronic Science and Technology of China, Chengdu, China.
Zhixin ZhangDepartment of Technology, Chengdu ExAb Biotechnology, Ltd, Chengdu, China 22922934@qq.com foxlll@126.com jason_zhang2011@hotmail.com.
Jian LiuDepartment of Rheumatology and Immunology, Sichuan Provincial People's Hospital, University of Electronic Science and Technology of China, Chengdu, China 22922934@qq.com foxlll@126.com jason_zhang2011@hotmail.com.
Qiao ZhouDepartment of Rheumatology and Immunology, Sichuan Provincial People's Hospital, University of Electronic Science and Technology of China, Chengdu, China 22922934@qq.com foxlll@126.com jason_zhang2011@hotmail.com.ORCID 0000-0003-2666-2283

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesSLE is a multifaceted autoimmune disorder with a complex pathogenesis involving genetic, environmental and hormonal factors, which converge on immune dysregulation. The T cell receptor (TCR) repertoire's role in SLE has garnered significant interest due to its potential in both diagnostics and therapeutics. Our study aimed to delineate the variances in the TCRβ repertoire between patients with SLE and healthy individuals, correlating these differences with the severity and subtypes of SLE.

methodsWe conducted an analysis of blood samples from 50 treatment-naive patients with SLE and 50 healthy donors, employing RNA extraction, high-throughput sequencing and subsequent bioinformatics analysis.

resultsOur findings revealed significant alterations in TRBV and TRBJ gene usage frequencies, indicative of a skewed TCR repertoire in patients with SLE. Notably, nine hub TRBV genes were identified as potential biomarkers for SLE with high diagnostic accuracy. Furthermore, we observed a reduction in TCR diversity, characterised by a lower diversity 50 value and increased clonal expansion, which correlated with disease severity.

conclusionsThe TCRβ repertoire is significantly altered in SLE, with potential implications for diagnostics and therapeutics. The identified hub genes may serve as novel biomarkers for SLE, and the findings contribute to the understanding of the immunopathogenesis of the disease.

Indexed as

Lupus Erythematosus, SystemicReceptors, Antigen, T-Cell, alpha-betaAdultBiomarkersCase-Control StudiesComputational BiologyFemaleHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedPrecision MedicineSeverity of Illness IndexYoung AdultBiomarkersReceptors, Antigen, T-Cell, alpha-betaAutoimmune DiseasesAutoimmunitySystemic Lupus Erythematosus

Identifiers

PMID39832907
PMCPMC11751993

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.