Evidence map›Paper›PMID 39829850›Full record

ArticlebioRxiv : the preprint server for biology2025

Diversity, connectivity and negative interactions define robust microbiome networks across land, stream, and sea.

Kacie T Kajihara, Mengting Yuan, Anthony S Amend, Nicolas Cetraro, John L Darcy, Kauaoa M S Fraiola, Kiana Frank, Margaret McFall-Ngai, Matthew C I Medeiros, Kirsten K Nakayama and 8 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Kacie T KajiharaPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0002-1741-5400
Mengting YuanPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0003-0017-3908
Anthony S AmendPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0002-0983-2984
Nicolas CetraroPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0009-0007-9733-5200
John L DarcyPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0003-4900-1891
Kauaoa M S FraiolaUnited States Geological Survey Pacific Islands Climate Adaptation Center, Honolulu, HI 96822, USA.ORCID 0000-0003-3215-6651
Kiana FrankPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0002-1988-3881
Margaret McFall-NgaiPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0002-6046-6238
Matthew C I MedeirosPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0002-0744-2018
Kirsten K NakayamaPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0003-2454-3010
Craig E NelsonDaniel K. Inouye Center for Microbial Oceanography: Research and Education, Department of Oceanography and Sea Grant College Program, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0003-2525-3496
Randi L RollinsPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0002-3768-4499
Wesley J SparagonDaniel K. Inouye Center for Microbial Oceanography: Research and Education, Department of Oceanography and Sea Grant College Program, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0002-9627-4174
Sean O I SwiftDaniel K. Inouye Center for Microbial Oceanography: Research and Education, Department of Oceanography and Sea Grant College Program, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0002-1170-4711
Mélisandre A TéfitPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0001-6824-1140
Joanne Y YewPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0003-4851-912X
Danyel YogiPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0001-5953-1461
Nicole A HynsonPacific Biosciences Research Center, University of Hawai'i at Mānoa, Honolulu, HI 96822, USA.ORCID 0000-0001-7098-9641

Funding

The Control of Insect Metabolism through Nutrition-based SymbiosisP20GM125508 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI PATRICIA A COUVILLON · 2018 to 2026
$21.2M
NIGMS NIH HHS P20 GM125508
6 · The paper itself

Abstract

In this era of rapid global change, factors influencing the stability of ecosystems and their functions have come into the spotlight. For decades the relationship between stability and complexity has been investigated in modeled and empirical systems, yet results remain largely context dependent. To overcome this we leverage a multiscale inventory of fungi and bacteria ranging from single sites along an environmental gradient, to habitats inclusive of land, sea and stream, to an entire watershed. We use networks to assess the relationship between microbiome complexity and robustness and identify fundamental principles of stability. We demonstrate that while some facets of complexity are positively associated with robustness, others are not. Beyond positive biodiversity

Identifiers

PMID39829850
PMCPMC11741383

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.