Evidence map›Paper›PMID 39829764›Full record

ArticlebioRxiv : the preprint server for biology2025

An integrated single-cell and spatial transcriptomic atlas of thyroid cancer progression identifies prognostic fibroblast subpopulations.

Matthew A Loberg, George J Xu, Sheau-Chiann Chen, Hua-Chang Chen, Claudia C Wahoski, Kailey P Caroland, Megan L Tigue, Heather A Hartmann, Jean-Nicolas Gallant, Courtney J Phifer and 24 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

34 authors.

Sheau-Chiann ChenORCID 0000-0002-5574-1434
Claudia C Wahoski
Kailey P CarolandORCID 0009-0003-8195-8615
Heather A HartmannORCID 0000-0002-6985-355X
Jean-Nicolas GallantORCID 0000-0003-4696-2013
Courtney J PhiferORCID 0000-0003-3321-4040
Andres Ocampo
Dayle K Wang
Reilly G FankhauserORCID 0000-0001-6318-4255
Kirti A Karunakaran
Sophia M Shaddy
James L NettervilleORCID 0000-0002-7282-8769
Carmen C Solorzano
Lindsay A BischoffORCID 0000-0002-7023-0675
Jennifer H Choe
Jennifer R Wang
Luciane T KagoharaORCID 0000-0003-1706-0950
Elizabeth M Jaffee
Ryan H Belcher
Fei Ye
Ethan Lee

Funding

The Role of Cancer-Associated Fibroblasts in Thyroid CarcinomaR01CA272875 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI WEISS, VIVIAN LEE · 2022 to 2025
$2.5M
Cancer-associated fibroblasts promote thyroid cancer malignancy through Wnt signalingF30CA281125 · NCI · VANDERBILT UNIVERSITY · PI LOBERG, MATTHEW A · 2023 to 2025
$141k
NCI NIH HHS F30 CA281125NCI NIH HHS R01 CA272875
6 · The paper itself

Abstract

Thyroid cancer progression from curable well-differentiated thyroid carcinoma to highly lethal anaplastic thyroid carcinoma is distinguished by tumor cell de-differentiation and recruitment of a robust stromal infiltrate. Combining an integrated thyroid cancer single-cell sequencing atlas with spatial transcriptomics and bulk RNA-sequencing, we define stromal cell subpopulations and tumor-stromal cross-talk occurring across the histologic and mutational spectrum of thyroid cancer. We identify distinct inflammatory and myofibroblastic cancer-associated fibroblast (iCAF and myCAF) populations and perivascular-like populations. The myCAF population is only found in malignant samples and is associated with tumor cell invasion,

Identifiers

PMID39829764
PMCPMC11741347

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.