Evidence map›Paper›PMID 39829760›Full record

ArticlebioRxiv : the preprint server for biology2025

Optimal sparsity in autoencoder memory models of the hippocampus.

Abhishek Shah, René Hen, Attila Losonczy, Stefano Fusi

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In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Abhishek ShahCenter for Theoretical Neuroscience, Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY.ORCID 0000-0001-9643-4564
René HenDepartments of Psychiatry and Neuroscience, Columbia University, New York, NY, USA.ORCID 0000-0002-7763-4162
Attila LosonczyDepartment of Neuroscience, Columbia University, New York, NY, USA.ORCID 0000-0002-7064-0252
Stefano FusiCenter for Theoretical Neuroscience, Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY.ORCID 0000-0002-3035-6652

Funding

Dissecting the role of the dentate gyrus microcircuit to improve cognitive discrimination in aging and Alzheimer's DiseaseRF1AG080818 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FUSI, STEFANO, HEN, RENE · 2023 to 2023
$2.5M
NIA NIH HHS RF1 AG080818
6 · The paper itself

Abstract

Storing complex correlated memories is significantly more efficient when memories are recoded to obtain compressed representations. Previous work has shown that compression can be implemented in a simple neural circuit, which can be described as a sparse autoencoder. The activity of the encoding units in these models recapitulates the activity of hippocampal neurons recorded in multiple experiments. However, these investigations have assumed that the level of sparsity is fixed and that inputs have the same statistics and, hence, that they are uniformly compressible. In contrast, biological agents encounter environments with vastly different memory demands and compressibility. Here, we investigate whether the compressibility of inputs determines optimal sparsity in sparse autoencoders. We find 1) that as the compressibility of inputs increases, the optimal coding level decreases, 2) that the desired coding level diverges from the observed coding level as a function of both memory demand and input compressibility, and 3) that optimal memory capacity is achieved when sparsity is weakly enforced. In addition, we characterize how sparsity and the strength of sparsity enforcement jointly control optimal performance. These results provide predictions for how sparsity in the hippocampus should change in response to environmental statistics and theoretical grounds for why sparsity is dynamically tuned in the brain.

Indexed as

CompressionMemorySparsity

Identifiers

PMID39829760
PMCPMC11741321

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.