Evidence map›Paper›PMID 39829673›Full record

ArticleVeterinary world2024

Genome-wide association study of genetic markers of coat color patterns in Sumatran native cattle.

Hartati Hartati, Widya Pintaka Bayu Putra, Eko Handiwirawan, Erpan Ramon, Jhon Firison, Zubir Zubir, Nandari Dyah Suretno, Mariyono Mariyono, Yenni Yusriani, Dewi Khosiya Robba and 7 more

Abstract read
In one paragraph

Article in Veterinary world, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Beyond the Classics: The Synergy of AI and Genomics Reveals an Expanded Repertoire of Pigmentation Genes.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Hartati HartatiResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Widya Pintaka Bayu PutraResearch Center for Applied Zoology, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Eko HandiwirawanResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Erpan RamonResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Jhon FirisonResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Zubir ZubirResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Nandari Dyah SuretnoResearch Center for Sustainable Production System and Life Cycle Assessment, National Research and Innovation Agency (BRIN), Banten, Indonesia.
Mariyono MariyonoResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Yenni YusrianiResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Dewi Khosiya RobbaResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Alfian DestomoResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Tika AnggraeniDirectorate of Laboratory Management, Research Facilities, and Science and Technology Areas, Deputy for Research and Innovation Infrastructure, National Research and Innovation Agency (BRIN), Indonesia.
Pajri AnwarDepartment of Animal Science, Faculty of Agriculture, Islamic University of Kuantan Singingi, Teluk Kuantan Riau, Indonesia.
Sulistiyoningtiyas IrmawantiResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Aprisal AprisalDepartment of Animal Husbandry and Veterinary Science, West Sumatra Provincial Government, Rasuna Said Street No. 68 Padang, Indonesia.
Simon ElieserResearch Center for Animal Husbandry, National Research and Innovation Agency (BRIN), Bogor 16911, Indonesia.
Dian KurniawatiDepartment of Animal Science, Faculty of Agriculture, University of Lampung 35145, Indonesia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background and Aim: Coat color is a phenotypic trait that is affected by many functional genes. In addition, coat color is an important characteristic of breeds in livestock. This study aimed to determine functional genes for coat color patterns in Sumatran native cattle in Indonesia using a genome-wide association study method. Materials and Methods: A bovine single nucleotide polymorphism (SNP) 50K BeadChip was used for the investigation. A total of 46. Sumatran native cattle of three colors as follows: Brown (36 animals), white (9 animals), and black (1 animal), were used as experimental animals. Results: Results showed that the SNP markers ARS-BFGL-NGS-75486 (p = 2.46 × 10 Conclusion: It can be concluded that

Indexed as

cattlecoat colorfunctional genegenome-wide association studySumatra

Identifiers

PMID39829673
PMCPMC11736373

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.