Identification of veterinary and medically important blood parasites using contrastive loss-based self-supervised learning.

Background and Aim: Zoonotic diseases caused by various blood parasites are important public health concerns that impact animals and humans worldwide. The traditional method of microscopic examination for parasite diagnosis is labor-intensive, time-consuming, and prone to variability among observers, necessitating highly skilled and experienced personnel. Therefore, an innovative approach is required to enhance the conventional method. This study aimed to develop a self-supervised learning (SSL) approach to identify zoonotic blood parasites from microscopic images, with an initial focus on parasite species classification. Materials and Methods: We acquired a public dataset featuring microscopic images of Giemsa-stained thin blood films of trypanosomes and other blood parasites, including Results: The proposed BYOL SSL model outperformed supervised learning models across all classes. Among the SSL models, ResNet50 consistently achieved high accuracy, reaching 0.992 in most classes, which aligns well with the patterns observed in the pre-trained uniform manifold approximation and projection representations. Fine-tuned SSL models exhibit high performance, achieving 95% accuracy and a 0.960 area under the curve of the receiver operating characteristics (ROC) curve even when fine-tuned with 1% of the data in the downstream process. Furthermore, 20% of the data for training with SSL models yielded ≥95% in all other statistical metrics, including accuracy, recall, precision, specification, F1 score, and ROC curve. As a result, multi-class classification prediction demonstrated that model performance exceeded 91% for the F1 score, except for the early stage of Conclusion: This approach can significantly enhance active surveillance efforts to improve disease control and prevent outbreaks, particularly in resource-limited settings. In addition, SSL addresses significant challenges, such as data variability and the requirement for extensive class labeling, which are common in biology and medical fields.