Evidence map›Paper›PMID 39827294›Full record

ArticleScientific reports2025

Second-generation BRAF inhibitor Encorafenib resistance is regulated by NCOA4-mediated iron trafficking in the drug-resistant malignant melanoma cells.

Ceyda Colakoglu Bergel, Isil Ezgi Eryilmaz, Gulsah Cecener, Unal Egeli

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Insights into pet-based radiogenomics in oncology: an updated systematic review.European journal of nuclear medicine and molecular imaging · 2025
    Pooled it
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ceyda Colakoglu BergelInstitute of Health Sciences, Department of Medical Biology, Bursa Uludag University, Bursa, Turkey.ORCID 0000-0002-7471-5071
Isil Ezgi EryilmazFaculty of Medicine, Medical Biology Department, Bursa Uludag University, Bursa, Turkey.ORCID 0000-0002-3316-316X
Gulsah CecenerFaculty of Medicine, Medical Biology Department, Bursa Uludag University, Bursa, Turkey.ORCID 0000-0002-3820-424X
Unal EgeliFaculty of Medicine, Medical Biology Department, Bursa Uludag University, Bursa, Turkey. egeli@uludag.edu.tr.ORCID 0000-0001-7904-883X

Funding

Bursa Uludag University, coordinatorship of scientific research TGA-2022-1086Türkiye Bilimsel ve Teknolojik Araştırma Kurumu 222S648
6 · The paper itself

Abstract

The current study established the first in vitro Encorafenib resistance protocol in BRAF-mutated malignant melanoma (MM) cells and investigated the resistance-related mechanisms. After establishing Encorafenib-resistant A375-MM cells, resistant-related mechanisms were investigated using WST-1, Annexin V, cell cycle, morphological analysis, live-cell, Western blot, RNA-Seq, transmission electron microscopy-(TEM), oxidative stress and iron colorimetric assay. The most resistant group, called A375-R, was determined in the cells treated with a constant dose of 10 nM over 3 months. The viability, apoptosis, and G0/G1 arrest reflected the acquired chemoresistance. Autophagic Beclin and LC3 proteins, and AKT signaling increased in the A375-R. RNA-Seq results also exhibited altered epigenetic regulation of resistance; particularly ferritin family members, ion transport pathways. Then, increased NCOA4, FTH1, and iron levels detected in A375-R suggest that the iron metabolism-related mechanism, such as ferritinophagy, might be triggered, which was supported by TEM and oxidative stress analysis. Iron storage, transport, and ferritinophagy have the promising potential to be targeted for combining with BRAF-targeted therapy to reverse Encorafenib resistance in MM. Moreover, this is the first study evaluating in vitro Encorafenib resistance mechanisms, and we suggest that our findings contribute to improving new drug combinations targeting BRAF and iron metabolism in different MM cells.

Indexed as

Drug Resistance, NeoplasmIronMelanomaProtein Kinase InhibitorsProto-Oncogene Proteins B-rafSulfonamidesApoptosisAutophagyCarbamatesCell Line, TumorHumansOxidative StressBRAF protein, humanCarbamatesencorafenibIronProtein Kinase InhibitorsProto-Oncogene Proteins B-rafSulfonamidesBRAFDrug resistanceEncorafenibFerritinophagyIron metabolismMalignant melanoma

Identifiers

PMID39827294
PMCPMC11742906

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.