Evidence map›Paper›PMID 39826027›Full record

ArticleGeroScience2025

Substrate stiffness dictates unique doxorubicin-induced senescence-associated secretory phenotypes and transcriptomic signatures in human pulmonary fibroblasts.

Huixun Du, Jacob P Rose, Joanna Bons, Li Guo, Taylor R Valentino, Fei Wu, Jordan B Burton, Nathan Basisty, Max Manwaring-Mueller, Priya Makhijani and 8 more

Abstract read
In one paragraph

Article in GeroScience, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Substrate Stiffness and Viscoelasticity Influence Fibroblast Senescence.Journal of biomedical materials research. Part A · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. The Role of Cellular Senescence in Oral Health and Disease.International journal of molecular sciences · 2026
    Review
  8. Integrating mechanical cues inFrontiers in immunology · 2026
    Review
  9. Article
  10. Review
  11. Article
  12. Review
  13. Involvement of SIRT1-mediated aging in liver diseases.Frontiers in cell and developmental biology · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors.

Huixun DuBuck Institute for Research On Aging, Novato, CA, 94945, USA.
Jacob P RoseBuck Institute for Research On Aging, Novato, CA, 94945, USA.
Joanna BonsBuck Institute for Research On Aging, Novato, CA, 94945, USA.
Li GuoLunenfeld Tanenbaum Research Institute, Sinai Health System, Toronto, ON, Canada.
Taylor R ValentinoBuck Institute for Research On Aging, Novato, CA, 94945, USA.
Fei WuBuck Institute for Research On Aging, Novato, CA, 94945, USA.
Jordan B BurtonBuck Institute for Research On Aging, Novato, CA, 94945, USA.
Nathan BasistyLongitudinal Studies Section, Translational Gerontology Branch, NIA, NIH, Baltimore, MA, USA.
Max Manwaring-MuellerBuck Institute for Research On Aging, Novato, CA, 94945, USA.
Priya MakhijaniBuck Institute for Research On Aging, Novato, CA, 94945, USA.
Nan ChenDivision of Cellular & Molecular Biology, Toronto General Hospital Research Institute (TGHRI), University Health Network, Toronto, ON, M5G 1L7, Canada.
Veronica ChangDivision of Cellular & Molecular Biology, Toronto General Hospital Research Institute (TGHRI), University Health Network, Toronto, ON, M5G 1L7, Canada.
Shawn WinerDepartment of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, M5S 1A8, Canada.
Judith CampisiBuck Institute for Research On Aging, Novato, CA, 94945, USA.
David FurmanBuck Institute for Research On Aging, Novato, CA, 94945, USA.
Andras NagyLunenfeld Tanenbaum Research Institute, Sinai Health System, Toronto, ON, Canada.
Birgit SchillingBuck Institute for Research On Aging, Novato, CA, 94945, USA.
Daniel A WinerBuck Institute for Research On Aging, Novato, CA, 94945, USA. dwiner@buckinstitute.org.ORCID 0000-0002-8702-0957

Funding

Training in Basic Research on Aging and Age-Related DiseaseT32AG000266 · NIA · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Lisa M Ellerby · 1998 to 2026
$13.8M
USC-Buck Institute Nathan Shock Admin CoreP30AG068345 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI LITHGOW, GORDON J · 2020 to 2024
$5.0M
Quantitative Proteomics to Develop Robust Senescence-Related Biomarkers for AgingU01AG060906 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI SCHILLING, BIRGIT · 2018 to 2022
$4.0M
The B Cell Insulin Receptor in Health and in Insulin ResistanceR01DK128435 · NIDDK · BUCK INSTITUTE FOR RESEARCH ON AGING · PI Dan Winer · 2022 to 2026
$2.9M
Orbitrap Fusion Lumos ETD with FAIMS ProS10OD028654 · OD · BUCK INSTITUTE FOR RESEARCH ON AGING · PI SCHILLING, BIRGIT · 2020 to 2020
$1.1M
TripleTOF 5600 High Resolution Mass SpectrometerS10OD016281 · OD · BUCK INSTITUTE FOR RESEARCH ON AGING · PI GIBSON, BRADFORD WAYNE · 2013 to 2013
$597k
CIHR PJT-186165Huiying Memorial Foundation Huiying Memorial FoundationNIA NIH HHS P30 AG068345NIA NIH HHS T32 AG000266NIA NIH HHS U01 AG060906NIDDK NIH HHS R01 DK128435NIH HHS R01DK128435NIH HHS S10 OD016281NIH HHS S10 OD028654T32 NIH fellowship NIA T32 AG000266
6 · The paper itself

Abstract

Cells are subjected to dynamic mechanical environments which impart forces and induce cellular responses. In age-related conditions like pulmonary fibrosis, there is both an increase in tissue stiffness and an accumulation of senescent cells. While senescent cells produce a senescence-associated secretory phenotype (SASP), the impact of physical stimuli on both cellular senescence and the SASP is not well understood. Here, we show that mechanical tension, modeled using cell culture substrate rigidity, influences senescent cell markers like SA-β-gal and secretory phenotypes. Comparing human primary pulmonary fibroblasts (IMR-90) cultured on physiological (2 kPa), fibrotic (50 kPa), and plastic (approximately 3 GPa) substrates, followed by senescence induction using doxorubicin, we identified unique high-stiffness-driven secretory protein profiles using mass spectrometry and transcriptomic signatures, both showing an enrichment in collagen proteins. Consistently, clusters of p21 + cells are seen in fibrotic regions of bleomycin induced pulmonary fibrosis in mice. Computational meta-analysis of single-cell RNA sequencing datasets from human interstitial lung disease confirmed these stiffness SASP genes are highly expressed in disease fibroblasts and strongly correlate with mechanotransduction and senescence-related pathways. Thus, mechanical forces shape cell senescence and their secretory phenotypes.

Indexed as

Cellular SenescenceDoxorubicinFibroblastsLungPulmonary FibrosisSenescence-Associated Secretory PhenotypeTranscriptomeAnimalsBleomycinCells, CulturedHumansMechanotransduction, CellularMiceBleomycinDoxorubicinSenescence-associated secretory phenotypeSenescent cellsTissue stiffness

Identifiers

PMID39826027
PMCPMC12181613

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.