Evidence map›Paper›PMID 39824811›Full record

ArticleNature communications2025

NKAPL facilitates transcription pause-release and bridges elongation to initiation during meiosis exit.

Zhenlong Kang, Chen Xu, Shuai Lu, Jie Gong, Ruoyu Yan, Gan Luo, Yuanyuan Wang, Qing He, Yifei Wu, Yitong Yan and 11 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. SEC Mediates mAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Zhenlong Kang *State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.ORCID http://orcid.org/0000-0003-3729-6514
Chen Xu *State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.ORCID http://orcid.org/0000-0002-6334-7672
Shuai Lu *State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Jie Gong *State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.ORCID http://orcid.org/0000-0003-2518-9439
Ruoyu Yan *State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Gan Luo *State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.ORCID http://orcid.org/0009-0004-0837-8451
Yuanyuan WangState Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Qing HeState Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Yifei WuState Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Yitong YanDepartment of Neurobiology, School of Basic Medical Science, Nanjing Medical University, Nanjing, People's Republic of China.
Baomei QianReproductive and Genetic Hospital, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, China.ORCID http://orcid.org/0000-0002-2723-374X
Shenglin HanState Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.ORCID http://orcid.org/0000-0002-7309-0380
Zhiwen BuState Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.ORCID http://orcid.org/0000-0002-7489-8023
Jinwen ZhangState Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.
Xian XiaJiangsu Key Laboratory of Neurodegeneration, Department of Pharmacology, Nanjing Medical University, Nanjing, China.
Liang ChenRNA Institute, Hubei Key Laboratory of Cell Homeostasis, College of Life Sciences, Wuhan University, Wuhan, China.ORCID http://orcid.org/0000-0002-6748-9416
Zhibin HuState Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China.ORCID http://orcid.org/0000-0002-8277-5234
Mingyan LinDepartment of Neurobiology, School of Basic Medical Science, Nanjing Medical University, Nanjing, People's Republic of China. linmingyan@njmu.edu.cn.
Zheng SunDepartment of Medicine, Baylor College of Medicine, Houston, TX, USA. zheng.sun@bcm.edu.ORCID http://orcid.org/0000-0002-6858-0633
Yayun GuState Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China. yayungu@njmu.edu.cn.
Lan YeState Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing, China. lanye@njmu.edu.cn.ORCID http://orcid.org/0000-0002-6306-8702

Funding

Inter- and transgenerational effects of paternal arsenic exposureR01ES034768 · NIEHS · BAYLOR COLLEGE OF MEDICINE · PI Zheng Sun · 2023 to 2026
$1.9M
Circadian clock gene Rev-erb in memory dysfunction in Alzheimer's diseaseRF1AG069966 · NIA · BAYLOR COLLEGE OF MEDICINE · PI SUN, ZHENG · 2021 to 2021
$1.8M
Circadian clock gene Rev-erb in memory dysfunction in Alzheimer's diseaseR01AG069966 · NIA · BAYLOR COLLEGE OF MEDICINE · PI SUN, ZHENG · 2024 to 2025
$1.1M
National Natural Science Foundation of China (National Science Foundation of China) 32070843, 82371617NIA NIH HHS R01 AG069966NIA NIH HHS RF1 AG069966NIEHS NIH HHS R01 ES034768
6 · The paper itself

Abstract

Transcription elongation, especially RNA polymerase II (Pol II) pause-release, is less studied than transcription initiation in regulating gene expression during meiosis. It is also unclear how transcription elongation interplays with transcription initiation. Here, we show that depletion of NKAPL, a testis-specific protein distantly related to RNA splicing factors, causes male infertility in mice by blocking the meiotic exit and downregulating haploid genes. NKAPL binds to promoter-associated nascent transcripts and co-localizes with DNA-RNA hybrid R-loop structures at GAA-rich loci to enhance R-loop formation and facilitate Pol II pause-release. NKAPL depletion prolongs Pol II pauses and stalls the SOX30/HDAC3 transcription initiation complex on the chromatin. Genetic variants in NKAPL are associated with azoospermia in humans, while mice carrying an NKAPL frameshift mutation (M349fs) show defective meiotic exit and transcriptomic changes similar to NKAPL depletion. These findings identify NKAPL as an R-loop-recognizing factor that regulates transcription elongation, which coordinates the meiotic-to-postmeiotic transcriptome switch in alliance with the SOX30/HDAC3-mediated transcription initiation.

Indexed as

MeiosisTranscription FactorsTranscription, GeneticAnimalsAzoospermiaChromatinHistone Deacetylase 3Histone DeacetylasesHumansInfertility, MaleMaleMiceMice, Inbred C57BLPromoter Regions, GeneticRNA Polymerase IITestisChromatinHistone Deacetylase 3Histone DeacetylasesRNA Polymerase IITranscription Factors

Identifiers

PMID39824811
PMCPMC11742055

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.