Evidence map›Paper›PMID 39820357›Full record

ArticleScientific data2025

A dataset for evaluating clinical research claims in large language models.

Boya Zhang, Alban Bornet, Anthony Yazdani, Philipp Khlebnikov, Marija Milutinovic, Hossein Rouhizadeh, Poorya Amini, Douglas Teodoro

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Using tournaments to calculate AUROC for zero-shot classification with LLMs.Findings of ACL. EMNLP. Conference on Empirical Methods in Natural Language Processing · 2025
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Boya ZhangDepartment of Radiology and Medical Informatics, Faculty of Medicine, University of Geneva, Geneva, Switzerland. boya.zhang@unige.ch.
Alban BornetDepartment of Radiology and Medical Informatics, Faculty of Medicine, University of Geneva, Geneva, Switzerland.ORCID http://orcid.org/0000-0002-7266-627X
Anthony YazdaniDepartment of Radiology and Medical Informatics, Faculty of Medicine, University of Geneva, Geneva, Switzerland.ORCID http://orcid.org/0000-0003-3309-6128
Philipp KhlebnikovRisklick AG, Bern, Switzerland.
Marija MilutinovicDepartment of Radiology and Medical Informatics, Faculty of Medicine, University of Geneva, Geneva, Switzerland.
Hossein RouhizadehDepartment of Radiology and Medical Informatics, Faculty of Medicine, University of Geneva, Geneva, Switzerland.
Poorya AminiRisklick AG, Bern, Switzerland.
Douglas TeodoroDepartment of Radiology and Medical Informatics, Faculty of Medicine, University of Geneva, Geneva, Switzerland. douglas.teodoro@unige.ch.ORCID http://orcid.org/0000-0001-6238-4503

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Large language models (LLMs) have the potential to enhance the verification of health claims. However, issues with hallucination and comprehension of logical statements require these models to be closely scrutinized in healthcare applications. We introduce CliniFact, a scientific claim dataset created from hypothesis testing results in clinical research, covering 992 unique interventions for 22 disease categories. The dataset used study arms and interventions, primary outcome measures, and results from clinical trials to derive and label clinical research claims. These claims were then linked to supporting information describing clinical trial results in scientific publications. CliniFact contains 1,970 instances from 992 unique clinical trials related to 1,540 unique publications. When evaluating LLMs against CliniFact, discriminative models, such as BioBERT with an accuracy of 80.2%, outperformed generative counterparts, such as Llama3-70B, which reached 53.6% accuracy (p-value < 0.001). Our results demonstrate the potential of CliniFact as a benchmark for evaluating LLM performance in clinical research claim verification.

Indexed as

Biomedical ResearchLarge Language ModelsClinical Trials as TopicHumans

Identifiers

PMID39820357
PMCPMC11739414

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.