Evidence map›Paper›PMID 39815761›Full record

Trial reportThe Journal of clinical endocrinology and metabolism2025

Genetic Variants Associated With the Biochemical Response to Vitamin D3 in the Multi-Ethnic Study of Atherosclerosis.

Cora M Best, Xiaohui Li, Jerome I Rotter, David K Prince, Simon Hsu, Andrew N Hoofnagle, David Siscovick, Kent D Taylor, Kayleen Williams, Erin D Michos and 9 more

Abstract readRandomized Controlled Trial
In one paragraph

Trial report in The Journal of clinical endocrinology and metabolism, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Trial
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Cora M BestDepartment of Medicine, Kidney Research Institute, University of Washington, Seattle, WA 98104, USA.ORCID 0000-0001-8400-9288
Xiaohui LiDepartment of Pediatrics, The Institute for Translational Genomics and Population Sciences, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA 90502, USA.
Jerome I RotterDepartment of Pediatrics, The Institute for Translational Genomics and Population Sciences, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA 90502, USA.
David K PrinceDepartment of Medicine, Kidney Research Institute, University of Washington, Seattle, WA 98104, USA.
Simon HsuDepartment of Medicine, Kidney Research Institute, University of Washington, Seattle, WA 98104, USA.ORCID 0000-0003-3780-294X
Andrew N HoofnagleDepartment of Medicine, Kidney Research Institute, University of Washington, Seattle, WA 98104, USA.
David SiscovickNew York Academy of Medicine, New York, NY 10029, USA.
Kent D TaylorDepartment of Pediatrics, The Institute for Translational Genomics and Population Sciences, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA 90502, USA.
Kayleen WilliamsDepartment of Biostatistics, University of Washington, Seattle, WA 98195, USA.
Erin D MichosDivision of Cardiology, Department of Medicine, Johns Hopkins University, Baltimore, MD 21205, USA.ORCID 0000-0002-5547-5084
Bruce M PsatyDepartments of Medicine, Epidemiology and Health Services, Cardiovascular Health Research Unit, University of Washington, Seattle, WA 98195, USA.
Steven SheaDepartment of Medicine, Columbia University Vagelos College of Physicians and Surgeons, New York, NY 10032, USA.
Kenneth M RiceDepartment of Biostatistics, University of Washington, Seattle, WA 98195, USA.
Karol E WatsonDepartment of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, CA 90095, USA.
Norrina B AllenDepartment of Preventive Medicine, Northwestern University, Chicago, IL 60611, USA.
Russell P TracyDepartment of Biochemistry, University of Vermont, Burlington, VT 05405, USA.
Cassianne Robinson-CohenDivision of Nephrology, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0003-4783-7046
Ian H de BoerDepartment of Medicine, Kidney Research Institute, University of Washington, Seattle, WA 98104, USA.
Bryan R KestenbaumDepartment of Medicine, Kidney Research Institute, University of Washington, Seattle, WA 98104, USA.

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI Sakeneh Zraika · 1986 to 2026
$41.4M
Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MILES Frome WILKINSON · 2003 to 2026
$40.4M
CHARGE Consortium: Omics Discovery for CVD and Aging PhenotypesR01HL105756 · NHLBI · UNIVERSITY OF WASHINGTON · PI Bruce M Psaty, NICHOLAS L SMITH · 2011 to 2026
$9.5M
Nutrition, Obesity and Atherosclerosis Training ProgramT32HL007028 · NHLBI · UNIVERSITY OF WASHINGTON · PI Karin E Bornfeldt · 1985 to 2026
$6.4M
Phosphorus and Vitamin D Metabolism and Cardiovascular Outcomes: The multi-ethniR01HL096875 · NHLBI · UNIVERSITY OF WASHINGTON · PI DE BOER, IAN H, KESTENBAUM, BRYAN R · 2010 to 2019
$5.2M
Comparative Safety and Efficacy of Low-dose Vitamin D in Kidney FailureK23DK136930 · NIDDK · UNIVERSITY OF WASHINGTON · PI Simon Hsu · 2023 to 2026
$747k
Common Genetic Variation of Vitamin D Binding Protein and Vitamin D KineticsF32DK128864 · NIDDK · UNIVERSITY OF WASHINGTON · PI BEST, CORA M · 2021 to 2021
$63k
HHSNHLBI NIH HHS N02 HL064278NHLBI NIH HHS R01 HL096875NHLBI NIH HHS R01 HL105756NHLBI NIH HHS T32 HL007028NIDDK NIH HHS DK063491NIDDK NIH HHS F32 DK128864NIDDK NIH HHS K23 DK136930NIDDK NIH HHS N02-HL-64278NIDDK NIH HHS P30 DK017047NIDDK NIH HHS P30 DK063491NIDDK NIH HHS R01HL105756
6 · The paper itself

Abstract

contextThe response to treatment with vitamin D varies between patients.

objectiveTo identify genetic variants associated with the biochemical response to vitamin D3 supplementation.

designRandomized placebo-controlled trial conducted between 2017 and 2019.

settingThe trial was nested in an ongoing community-based cohort study, the Multi-Ethnic Study of Atherosclerosis.

intervention2000 International Units of vitamin D3 or placebo daily for 16 weeks.

participantsThe analytic sample included 427 participants assigned to vitamin D3 (mean age, 73 years; 54% females) and was 36% White, 33% Black, 18% Hispanic, and 14% Chinese.

main outcome measuresThe biochemical response to vitamin D3 included changes in serum concentrations of 1,25-dihydroxyvitamin D3 [1,25(OH)2D3], PTH, and 25-hydroxyvitamin D3 [25(OH)D3].

resultsIn genome-wide analyses, single nucleotide polymorphisms in 8 regions of the genome had significant association (P < 5E-08) with 1 of the traits (2 with change in 1,25(OH)2D3, 1 with change in PTH, and 5 with change in 25(OH)D3). rs16867276 within an intergenic region on 2q31 was associated with change in serum 1,25(OH)2D3 (+8.37 pg/mL difference per effect allele; P = 4.93E-08) and was the only locus that achieved genome-wide significance in transethnic meta-analysis. rs114044709 adjacent to FAM20A, which encodes a protein required for biomineralization, was associated with change in PTH among Black participants (+20.32 pg/mL difference per effect allele; P = 1.34E-08). In candidate analyses, single nucleotide polymorphisms within SULT2A1 and CYP24A1 had significant association (P < .05÷36 = .0014) with the changes in 1,25(OH)2D3 and PTH, respectively.

conclusionOur results reveal potential new pathways of vitamin D regulation that require replication in other vitamin D trials.

Indexed as

AtherosclerosisCholecalciferolPolymorphism, Single NucleotideVitamin D DeficiencyAgedAged, 80 and overCalcitriolDietary SupplementsEthnicityFemaleFollow-Up StudiesGenome-Wide Association StudyHumansMaleMiddle AgedParathyroid HormoneCalcitriolCholecalciferolParathyroid HormoneVitamin D3 24-Hydroxylaseclinical trialsnutritionpharmacogenomicsPTH/Vit D/FGF23

Identifiers

PMID39815761
PMCPMC12448636

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.