Evidence map›Paper›PMID 39814800›Full record

ArticleNature communications2025

Syntalos: a software for precise synchronization of simultaneous multi-modal data acquisition and closed-loop interventions.

Matthias Klumpp, Lee Embray, Filippo Heimburg, Ana Luiza Alves Dias, Justus Simon, Alexander Groh, Andreas Draguhn, Martin Both

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Matthias KlumppInstitute of Physiology and Pathophysiology, Medical Faculty, Heidelberg University, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-2981-043X
Lee EmbrayInstitute of Physiology and Pathophysiology, Medical Faculty, Heidelberg University, Heidelberg, Germany.
Filippo HeimburgInstitute of Physiology and Pathophysiology, Medical Faculty, Heidelberg University, Heidelberg, Germany.
Ana Luiza Alves DiasBrain Institute, Federal University of Rio Grande do Norte, Natal, Brazil.
Justus SimonInstitute of Physiology and Pathophysiology, Medical Faculty, Heidelberg University, Heidelberg, Germany.ORCID http://orcid.org/0009-0008-0777-1226
Alexander GrohInstitute of Physiology and Pathophysiology, Medical Faculty, Heidelberg University, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-5308-5971
Andreas DraguhnInstitute of Physiology and Pathophysiology, Medical Faculty, Heidelberg University, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-6243-5582
Martin BothInstitute of Physiology and Pathophysiology, Medical Faculty, Heidelberg University, Heidelberg, Germany. mboth@physiologie.uni-heidelberg.de.ORCID http://orcid.org/0000-0003-1847-9796

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) BO 3512/2-1Deutsche Forschungsgemeinschaft (German Research Foundation) GR3757/4-1
6 · The paper itself

Abstract

Complex experimental protocols often require multi-modal data acquisition with precisely aligned timing, as well as state- and behavior-dependent interventions. Tailored solutions are mostly restricted to individual experimental setups and lack flexibility and interoperability. We present an open-source, Linux-based integrated software solution, called 'Syntalos', for simultaneous acquisition and synchronization of data from an arbitrary number of sources, including multi-channel electrophysiological recordings and different live imaging devices, as well as closed-loop, real-time interventions with different actuators. Precisely matching timestamps for all inputs are ensured by continuous statistical analysis and correction of individual devices' timestamps. New data sources can be integrated with minimal programming skills. Data is stored in a comprehensively structured format to facilitate pooling or sharing data between different laboratories. Syntalos enables precisely synchronized multi-modal recordings as well as closed-loop interventions for multiple experimental approaches. Preliminary neuroscientific experiments on mice with different research questions show the successful performance and easy-to-learn structure of the software suite.

Indexed as

SoftwareAnimalsMice

Identifiers

PMID39814800
PMCPMC11736130

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.