Evidence map›Paper›PMID 39814716›Full record

ArticleNature communications2025

Structural basis of Spliced Leader RNA recognition by the Trypanosoma brucei cap-binding complex.

Harald Bernhard, Hana Petržílková, Barbora Popelářová, Kamil Ziemkiewicz, Karolina Bartosik, Marcin Warmiński, Laura Tengo, Henri Gröger, Luciano G Dolce, Cameron D Mackereth and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Harald BernhardEMBL Grenoble, 71 Avenue des Martyrs, Grenoble, France.
Hana PetržílkováEMBL Grenoble, 71 Avenue des Martyrs, Grenoble, France.ORCID http://orcid.org/0009-0007-3371-7920
Barbora PopelářováEMBL Grenoble, 71 Avenue des Martyrs, Grenoble, France.ORCID http://orcid.org/0000-0003-3760-0539
Kamil ZiemkiewiczCentre of New Technologies, University of Warsaw, Warsaw, Poland.
Karolina BartosikInstitute of Organic Chemistry, Center for Molecular Biosciences Innsbruck, University of Innsbruck, Innsbruck, Austria.ORCID http://orcid.org/0000-0001-8094-6741
Marcin WarmińskiDivision of Biophysics, Institute of Experimental Physics, Faculty of Physics, University of Warsaw, Warsaw, Poland.ORCID http://orcid.org/0000-0002-1071-3405
Laura TengoEMBL Grenoble, 71 Avenue des Martyrs, Grenoble, France.ORCID http://orcid.org/0000-0002-6883-6459
Henri GrögerEMBL Grenoble, 71 Avenue des Martyrs, Grenoble, France.ORCID http://orcid.org/0009-0003-5147-947X
Luciano G DolceEMBL Grenoble, 71 Avenue des Martyrs, Grenoble, France.ORCID http://orcid.org/0000-0003-0871-297X
Cameron D MackerethUniversity of Bordeaux, INSERM, CNRS, ARNA Laboratory, U1212, UMR 5320, Bordeaux, France.ORCID http://orcid.org/0000-0002-0776-7947
Ronald MicuraInstitute of Organic Chemistry, Center for Molecular Biosciences Innsbruck, University of Innsbruck, Innsbruck, Austria.ORCID http://orcid.org/0000-0003-2661-6105
Jacek JemielityCentre of New Technologies, University of Warsaw, Warsaw, Poland.ORCID http://orcid.org/0000-0001-7633-788X
Eva KowalinskiEMBL Grenoble, 71 Avenue des Martyrs, Grenoble, France. kowalinski@embl.fr.ORCID http://orcid.org/0000-0002-9785-9027

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-20-CE11-0016Amt der Tiroler Landesregierung (Tyrolean Science Fund) F.33309/2021Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) F8011-BAustrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P31691Narodowe Centrum Nauki (National Science Centre) 2019/33/B/ST4/01843
6 · The paper itself

Abstract

Kinetoplastids are a clade of eukaryotic protozoans that include human parasitic pathogens like trypanosomes and Leishmania species. In these organisms, protein-coding genes are transcribed as polycistronic pre-mRNAs, which need to be processed by the coupled action of trans-splicing and polyadenylation to yield monogenic mature mRNAs. During trans-splicing, a universal RNA sequence, the spliced leader RNA (SL RNA) mini-exon, is added to the 5'-end of each mRNA. The 5'-end of this mini-exon carries a hypermethylated cap structure and is bound by a trypanosomatid-specific cap-binding complex (CBC). The function of three of the kinetoplastid CBC subunits is unknown, but an essential role in cap-binding and trans-splicing has been suggested. Here, we report cryo-EM structures that reveal the molecular architecture of the Trypanosoma brucei CBC (TbCBC) complex. We find that TbCBC interacts with two distinct features of the SL RNA. The TbCBP20 subunit interacts with the m

Indexed as

Protozoan ProteinsRNA CapsRNA, ProtozoanRNA, Spliced LeaderTrypanosoma brucei bruceiCryoelectron MicroscopyModels, MolecularProtein BindingTrans-SplicingProtozoan ProteinsRNA CapsRNA, ProtozoanRNA, Spliced Leader

Identifiers

PMID39814716
PMCPMC11735809

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.