Evidence map›Paper›PMID 39812870›Full record

ArticleAmino acids2025

Systematic qualitative proteome-wide analysis of lysine malonylation profiling in Platycodon grandiflorus.

Qingshan Yang, Shaowei Xu, Weimin Jiang, Fei Meng, Shuting Wang, Zongping Sun, Na Chen, Daiyin Peng, Juan Liu, Shihai Xing

Abstract read
In one paragraph

Article in Amino acids, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

10 authors.

Qingshan YangCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Shaowei XuCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Weimin JiangHunan Key Laboratory for Conservation and Utilization of Biological Resources in the Nanyue Mountainous Region, College of Life Sciences and Environment, Hengyang Normal University, Hengyang, 421008, Hunan, China.
Fei MengCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Shuting WangCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Zongping SunEngineering Technology Research Center of Anti-Aging, Chinese Herbal Medicine, Fuyang Normal University, Fuyang, 236037, China.
Na ChenJoint Research Center for Chinese Herbal Medicine of Anhui of IHM, Hefei Comprehensive National Science Center, Bozhou, 236814, China.
Daiyin PengCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China.
Juan LiuCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China. liujuan@ahtcm.edu.cn.
Shihai XingCollege of Pharmacy, Anhui University of Chinese Medicine, Hefei, 230012, China. xshshihai@163.com.

Funding

Anhui University Collaborative Innovation Project Grant No. GXXT-2019-043, Grant No. GXXT-2019-049Key Natural Science Research Projects in Anhui Universities No. 2022AH050461, No. KJ2019A0453 and KJ2018A0275Open Project of Provincial and Ministerial Scientific Research Platform, Fuyang Normal University No. FSKFKT010DProject from Joint Research Center for Chinese Herbal Medicine of Anhui of IHM yjzx2023001
6 · The paper itself

Abstract

In recent years, it was found that lysine malonylation modification can affect biological metabolism and play an important role in plant life activities. Platycodon grandiflorus, an economic crop and medicinal plant, had no reports on malonylation in the related literature. This study qualitatively introduces lysine malonylation in P. grandiflorus. A total of 888 lysine malonylation-modified proteins in P. grandiflorus were identified, with a total of 1755 modification sites. According to the functional annotation, malonylated proteins were closely related to catalysis, binding, and other reactions. Subcellular localization showed that related proteins were enriched in chloroplasts, cytoplasm, and nuclei, indicating that this modification could regulate various metabolic processes. Motif analysis showed the enrichment of Alanine (A), Cysteine (C), Glycine (G), and Valine (V) amino acids surrounding malonylated lysine residues. Metabolic pathway and protein-protein interaction network analyses suggested these modifications are mainly involved in plant photosynthesis. Moreover, malonylated proteins are also involved in stress and defense responses. This study shows that lysine malonylation can affect a variety of biological processes and metabolic pathways, and the contents are reported for the first time in P. grandiflorus, which can provide important information for further research on P. grandiflorus and lysine malonylation's role in environment stress, photosynthesis, and secondary metabolites enrichment.

Indexed as

LysineMalonatesPlant ProteinsPlatycodonProteomeProtein Interaction MapsProtein Processing, Post-TranslationalLysineMalonatesPlant ProteinsProteomeHeavily-malonylatedLysine malonylationPlatycodon grandiflorusPolysaccharide biosynthesisSaponin biosynthesis

Identifiers

PMID39812870
PMCPMC11735498

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