Evidence map›Paper›PMID 39809780›Full record

ArticleNature communications2025

Robust genome editing activity and the applications of enhanced miniature CRISPR-Cas12f1.

Soo-Ji Park, Sungjin Ju, Won Jun Jung, Tae Yeong Jeong, Da Eun Yoon, Jang Hyeon Lee, Jiyun Yang, Hojin Lee, Jungmin Choi, Hyeon Soo Kim and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
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  3. Article
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  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Advances in CRISPR/Cas9-Based Gene Editing in Filamentous Fungi.Journal of fungi (Basel, Switzerland) · 2025
    Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Soo-Ji Park *Department of Physiology, Korea University College of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0009-0003-0417-7487
Sungjin Ju *Department of Physiology, Korea University College of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0009-0003-0545-1708
Won Jun JungDepartment of Physiology, Korea University College of Medicine, Seoul, Republic of Korea.
Tae Yeong JeongDepartment of Physiology, Korea University College of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0009-0003-0479-7571
Da Eun YoonDepartment of Physiology, Korea University College of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0009-0000-8499-2593
Jang Hyeon LeeDepartment of Physiology, Korea University College of Medicine, Seoul, Republic of Korea.
Jiyun YangDepartment of Physiology, Korea University College of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0009-0005-3236-8971
Hojin LeeDepartment of Biomedical Sciences, Korea University College of Medicine, Seoul, Republic of Korea.
Jungmin ChoiDepartment of Biomedical Sciences, Korea University College of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0002-8614-0973
Hyeon Soo KimDepartment of Biomedical Sciences, Korea University College of Medicine, Seoul, Republic of Korea.
Kyoungmi KimDepartment of Physiology, Korea University College of Medicine, Seoul, Republic of Korea. kim0912@korea.ac.kr.ORCID http://orcid.org/0000-0003-0941-806X

Funding

National Research Foundation of Korea (NRF) RS-2023-00220894
6 · The paper itself

Abstract

With recent advancements in gene editing technology using the CRISPR/Cas system, there is a demand for more effective gene editors. A key factor facilitating efficient gene editing is effective CRISPR delivery into cells, which is known to be associated with the size of the CRISPR system. Accordingly, compact CRISPR-Cas systems derived from various strains are discovered, among which Un1Cas12f1 is 2.6 times smaller than SpCas9, providing advantages for gene therapy research. Despite extensive engineering efforts to improve Un1Cas12f1, the editing efficiency of Un1Cas12f1 is still shown to be low depending on the target site. To overcome this limitation, we develop enhanced Cas12f1 (eCas12f1), which exhibits gene editing activity similar to SpCas9 and AsCpf1, even in gene targets where previously improved Un1Cas12f1 variants showed low gene editing efficiency. Furthermore, we demonstrate that eCas12f1 efficiently induces apoptosis in cancer cells and is compatible with base editing and regulation of gene expression, verifying its high utility and applicability in gene therapy research.

Indexed as

CRISPR-Cas SystemsGene EditingApoptosisCell Line, TumorGenetic TherapyHEK293 CellsHumans

Identifiers

PMID39809780
PMCPMC11733285

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.