Evidence map›Paper›PMID 39808751›Full record

ArticleJCO clinical cancer informatics2025

Validation of Clinical Dynamic Contrast-Enhanced Magnetic Resonance Imaging Perfusion Modeling and Neoadjuvant Chemotherapy Response Prediction in Breast Cancer Using

John Whitman, Vikram Adhikarla, Lusine Tumyan, Joanne Mortimer, Wei Huang, Russell Rockne, Joesph R Peterson, John Cole

Abstract readValidation Study
In one paragraph

Article in JCO clinical cancer informatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

John WhitmanSimBioSys Inc, Chicago, IL.ORCID 0000-0001-5848-0164
Vikram AdhikarlaDivision of Mathematical Oncology and Computational Systems Biology, Beckman Research Institute, City of Hope, Duarte, CA.
Lusine TumyanDepartment of Radiology, City of Hope National Medical Center, Duarte, CA.
Joanne MortimerDepartment of Medical Oncology and Medical Therapeutics Research, City of Hope National Medical Center, Duarte, CA.ORCID 0000-0002-2935-1934
Wei HuangAdvanced Imaging Research Center, Oregon Health and Science University, Portland, OR.
Russell RockneDivision of Mathematical Oncology and Computational Systems Biology, Beckman Research Institute, City of Hope, Duarte, CA.ORCID 0000-0002-1557-159X
Joesph R PetersonSimBioSys Inc, Chicago, IL.ORCID 0000-0003-0989-5288
John ColeSimBioSys Inc, Chicago, IL.

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI John Charles Williams · 1985 to 2026
$86.3M
Shutter-Speed Model DCE-MRI for Assessment of Response to Cancer TherapyU01CA154602 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI HUANG, WEI, RYAN, CHRISTOPHER WALTER · 2011 to 2015
$2.9M
Multicenter Quantitative MRI Assessment of Breast Cancer Therapy ResponseR01CA248192 · NCI · WILLIAM BEAUMONT HOSPITAL RESEARCH INST · PI WEI HUANG, James H Holmes · 2021 to 2026
$2.8M
NCI NIH HHS P30 CA033572NCI NIH HHS R01 CA248192NCI NIH HHS U01 CA154602
6 · The paper itself

Abstract

purposePerfusion modeling presents significant opportunities for imaging biomarker development in breast cancer but has historically been held back by the need for data beyond the clinical standard of care (SoC) and uncertainty in the interpretability of results. We aimed to design a perfusion model applicable to breast cancer SoC dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) series with results stable to low temporal resolution imaging, comparable with published results using full-resolution DCE-MRI, and correlative with orthogonal imaging modalities indicative of biophysical markers.

methodsSubsampled high-temporal-resolution DCE-MRI series were run through our perfusion model and resulting fits were compared for consistency. The fits were also compared against previously published results from institutions using the full resolution series. The model was then evaluated on a separate cohort for validity of biomarker indications. Finally, the model was used as a fundamental part of predicting response to neoadjuvant chemotherapy (NACT).

resultsTemporally subsampled DCE-MRI series yield perfusion fit variations on the scale of 1% of the tumor median value when input frames are varied. Fits generated from pseudoclinical series are within the variation range seen between imaging sites (ρ = 0.55), voxel-wise. The model also demonstrates significant correlations with orthogonal positron emission tomography imaging, indicating potential for use as a biomarker proxy. Specifically, using the perfusion fits as the grounding for a biophysical simulation of response, we correctly predict the pathologic complete response status after NACT in 15 of 18 patients, for an accuracy of 0.83, with a specificity and sensitivity of 0.83 as well.

conclusionClinical DCE-MRI data may be leveraged to provide stable perfusion fit results and indirectly interrogate the tumor microenvironment. These fits can then be used downstream for prediction of response to NACT with high accuracy.

Indexed as

Breast NeoplasmsFluorodeoxyglucose F18Magnetic Resonance ImagingPositron-Emission TomographyTrastuzumabAdultAgedContrast MediaFemaleHumansMiddle AgedNeoadjuvant TherapyOrganometallic CompoundsRadiopharmaceuticalsContrast MediaFluorodeoxyglucose F18Organometallic CompoundsRadiopharmaceuticalsTrastuzumab

Identifiers

PMID39808751
PMCPMC11902905

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.