Evidence map›Paper›PMID 39808673›Full record

ArticlePLoS pathogens2025

Naturally occurring variation in a cytochrome P450 modifies thiabendazole responses independently of beta-tubulin.

J B Collins, Clayton M Dilks, Steffen R Hahnel, Briana Rodriguez, Bennett W Fox, Elizabeth Redman, Jingfang Yu, Brittany Cooke, Kateryna Sihuta, Mostafa Zamanian and 4 more

Abstract read
In one paragraph

Article in PLoS pathogens, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Methods for single-pairmicroPublication biology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

J B CollinsDepartment of Biology, Johns Hopkins University, Baltimore, Maryland, United States of America.ORCID 0000-0003-0808-5216
Clayton M DilksMolecular Biosciences, Northwestern University, Evanston, Illinois, United States of America.
Steffen R HahnelMolecular Biosciences, Northwestern University, Evanston, Illinois, United States of America.
Briana RodriguezMolecular Biosciences, Northwestern University, Evanston, Illinois, United States of America.
Bennett W FoxBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York, United States of America.
Elizabeth RedmanDepartment of Comparative Biology and Experimental Medicine, University of Calgary, Calgary, Canada.
Jingfang YuBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York, United States of America.
Brittany CookeDepartment of Molecular Genetics, University of Toronto, Toronto, Canada.
Kateryna SihutaDepartment of Molecular Genetics, University of Toronto, Toronto, Canada.
Mostafa ZamanianDepartment of Pathobiological Sciences, University of Wisconsin, Madison, Wisconsin, United States of America.
Peter J RoyDepartment of Molecular Genetics, University of Toronto, Toronto, Canada.
Frank C SchroederBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York, United States of America.
John S GilleardDepartment of Comparative Biology and Experimental Medicine, University of Calgary, Calgary, Canada.
Erik C AndersenDepartment of Biology, Johns Hopkins University, Baltimore, Maryland, United States of America.ORCID 0000-0003-0229-9651

Funding

Discovery of Novel Benzimidazole Resistance MechanismsR01AI153088 · NIAID · NORTHWESTERN UNIVERSITY · PI Erik Christian Andersen, James Solomon Fraser · 2020 to 2026
$4.3M
NIAID NIH HHS R01 AI153088
6 · The paper itself

Abstract

Widespread anthelmintic resistance has complicated the management of parasitic nematodes. Resistance to the benzimidazole (BZ) drug class is nearly ubiquitous in many species and is associated with mutations in beta-tubulin genes. However, mutations in beta-tubulin alone do not fully explain all BZ resistance. We performed a genome-wide association study using a genetically diverse panel of Caenorhabditis elegans strains to identify loci that contribute to resistance to the BZ drug thiabendazole (TBZ). We identified a quantitative trait locus (QTL) on chromosome V independent of all beta-tubulin genes and overlapping with two promising candidate genes, the cytochrome P450 gene cyp-35D1 and the nuclear hormone receptor nhr-176. Both genes were previously demonstrated to play a role in TBZ metabolism. NHR-176 binds TBZ and induces the expression of CYP-35D1, which metabolizes TBZ. We generated single gene deletions of cyp-35D1 and nhr-176 and found that both genes play a role in TBZ response. A predicted high-impact lysine-to-glutamate substitution at position 267 (K267E) in CYP-35D1 was identified in a sensitive strain, and reciprocal allele replacement strains in different genetic backgrounds were used to show that the lysine allele conferred increased TBZ resistance. Using competitive fitness assays, we found that neither allele was deleterious, but the lysine allele was selected in the presence of TBZ. Additionally, we found that the lysine allele significantly increased the rate of TBZ metabolism compared to the glutamate allele. Moreover, yeast expression assays showed that the lysine version of CYP-35D1 had twice the enzymatic activity of the glutamate allele. To connect our results to parasitic nematodes, we analyzed four Haemonchus contortus cytochrome P450 orthologs but did not find variation at the 267 position in fenbendazole-resistant populations. Overall, we confirmed that variation in this cytochrome P450 gene is the first locus independent of beta-tubulin to play a role in BZ resistance.

Indexed as

AnthelminticsCaenorhabditis elegansCaenorhabditis elegans ProteinsCytochrome P-450 Enzyme SystemDrug ResistanceThiabendazoleTubulinAnimalsGenome-Wide Association StudyQuantitative Trait LociAnthelminticsCaenorhabditis elegans ProteinsCytochrome P-450 Enzyme SystemThiabendazoleTubulin

Identifiers

PMID39808673
PMCPMC11771912

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.