Evidence map›Paper›PMID 39808585›Full record

ArticleJournal of the American Chemical Society2025

Context-Dependent Heterotypic Assemblies of Intrinsically Disordered Peptides.

Yuchen Qiao, Ayisha Zia, Grace Wu, Zhiyu Liu, Jiaqi Guo, Matthew Chu, Hongjian He, Fengbin Wang, Bing Xu

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yuchen QiaoDepartment of Chemistry, Brandeis University, 415 South St., Waltham, Massachusetts 02454, United States.
Ayisha ZiaDepartment of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, Birmingham, Alabama 35233, United States.
Grace WuDepartment of Chemistry, Brandeis University, 415 South St., Waltham, Massachusetts 02454, United States.
Zhiyu LiuDepartment of Chemistry, Brandeis University, 415 South St., Waltham, Massachusetts 02454, United States.
Jiaqi GuoDepartment of Chemistry, Brandeis University, 415 South St., Waltham, Massachusetts 02454, United States.ORCID 0000-0002-0254-0401
Matthew ChuDepartment of Chemistry, Brandeis University, 415 South St., Waltham, Massachusetts 02454, United States.ORCID 0009-0004-3080-7013
Hongjian HeDepartment of Chemistry, Brandeis University, 415 South St., Waltham, Massachusetts 02454, United States.
Fengbin WangDepartment of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, Birmingham, Alabama 35233, United States.
Bing XuDepartment of Chemistry, Brandeis University, 415 South St., Waltham, Massachusetts 02454, United States.ORCID 0000-0002-4639-387X

Funding

Subcellular Enzyme-instructed self-assembly for molecular anticancer nanomedicinesR01CA142746 · NCI · BRANDEIS UNIVERSITY · PI Bing Xu · 2010 to 2026
$6.4M
Understanding and using microbial conductive nanowiresR00GM138756 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI WANG, FENGBIN · 2022 to 2024
$895k
Understanding and using microbial conductive nanowiresK99GM138756 · NIGMS · UNIVERSITY OF VIRGINIA · PI WANG, FENGBIN · 2021 to 2022
$130k
NCI NIH HHS R01 CA142746NIGMS NIH HHS K99 GM138756NIGMS NIH HHS R00 GM138756
6 · The paper itself

Abstract

Despite their critical role in context-dependent interactions for protein functions, intrinsically disordered regions (IDRs) are often overlooked for designing peptide assemblies. Here, we exploit IDRs to enable context-dependent heterotypic assemblies of intrinsically disordered peptides, where "context-dependent" refers to assembly behavior driven by interactions with other molecules. By attaching an aromatic segment to oppositely charged intrinsically disordered peptides, we achieve a nanofiber formation. Although the same-charged peptides cannot self-assemble, oppositely charged peptides form heterotypic nanofibers. Cryo-EM analysis reveals a β-sheet arrangement within the ordered core of these nanofibers, conformational heterogeneity, and a disorder-to-order continuum and shows a high number of hydrogen bonds between tyrosine and lysine ε-amine. Additionally, this work demonstrates a post-assembly morphological change resulting from local conformational flexibility. While equal molar mixtures of the charged intrinsically disordered peptides yield nanofibers, doubling the positively charged peptides after assembly produces bundles of nanofibers. Furthermore, reducing the number of aromatic amino acid residues reduces bundle formation. Demonstrating context-dependent self-assembly of intrinsically disordered peptides and revealing atomistic insights into heterotypic assemblies of intrinsically disordered peptides for the first time, this work illustrates a straightforward approach to enable heterotypic intrinsically disordered peptides to self-assemble for the design of adaptive, multifunctional peptide nanomaterials.

Indexed as

Intrinsically Disordered ProteinsPeptidesCryoelectron MicroscopyHydrogen BondingModels, MolecularNanofibersIntrinsically Disordered ProteinsPeptides

Identifiers

PMID39808585
PMCPMC11841035

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.