Evidence map›Paper›PMID 39808475›Full record

ArticleJournal of the American Chemical Society2025

Analogue-Sensitive Inhibition of Histone Demethylases Uncovers Member-Specific Function in Ribosomal Protein Synthesis.

Jordan Kuwik, Valerie Scott, Sara Chedid, Stephanie Stransky, Kathryn Hinkelman, Sam Kavoosi, Michael Calderon, Simon Watkins, Simone Sidoli, Kabirul Islam

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Jordan KuwikDepartment of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
Valerie ScottDepartment of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
Sara ChedidDepartment of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
Stephanie StranskyDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, New York 10461, United States.
Kathryn HinkelmanDepartment of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
Sam KavoosiDepartment of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.ORCID 0000-0003-2618-5528
Michael CalderonDepartment of Cell Biology, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
Simon WatkinsDepartment of Cell Biology, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.
Simone SidoliDepartment of Biochemistry, Albert Einstein College of Medicine, Bronx, New York 10461, United States.
Kabirul IslamDepartment of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.ORCID 0000-0002-8680-6130

Funding

Site-Specific Photochemistry on Epigenetic Readers for Interactome ProfilingR01GM123234 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ISLAM, KABIRUL · 2017 to 2021
$1.5M
Crosslinking-Assisted Substrate Identification for Lysine DemethylasesR01GM130752 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ISLAM, KABIRUL · 2020 to 2023
$1.2M
Orbitrap Exploris 480 Basic SystemS10OD030286 · OD · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI SIDOLI, SIMONE · 2021 to 2021
$600k
Request for a Nikon A1 confocal microscopeS10OD019973 · OD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WATKINS, SIMON C · 2015 to 2015
$358k
NIGMS NIH HHS R01 GM123234NIGMS NIH HHS R01 GM130752NIH HHS S10 OD019973NIH HHS S10 OD030286
6 · The paper itself

Abstract

Lysine demethylases (KDMs) catalyze the oxidative removal of the methyl group from histones using earth-abundant iron and the metabolite 2-oxoglutarate (2OG). KDMs have emerged as master regulators of eukaryotic gene expression and are novel drug targets; small-molecule inhibitors of KDMs are in the clinical pipeline for the treatment of human cancer. Yet, mechanistic insights into the functional heterogeneity of human KDMs are limited, necessitating the development of chemical probes for precision targeting. Herein, we identify analogue-sensitive (

Indexed as

Enzyme InhibitorsHistone DemethylasesJumonji Domain-Containing Histone DemethylasesRibosomal ProteinsHumansEnzyme InhibitorsHistone DemethylasesJumonji Domain-Containing Histone DemethylasesKDM4A protein, humanRibosomal Proteins

Identifiers

PMID39808475
PMCPMC11783601

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.