Evidence map›Paper›PMID 39807864›Full record

ArticlemBio2025

Virulence factor discovery identifies associations between the Fic gene family and Fap2

Geicho Nakatsu, Duhyun Ko, Monia Michaud, Eric A Franzosa, Xochitl C Morgan, Curtis Huttenhower, Wendy S Garrett

Abstract read
In one paragraph

Article in mBio, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Pathogenic Roles ofPathogens (Basel, Switzerland) · 2026
    Review
  2. Review
  3. Article
  4. Review
  5. Addressing controversy inGut microbes · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Geicho NakatsuDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Duhyun KoDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Monia MichaudDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Eric A FranzosaHarvard T.H. Chan Microbiome in Public Health Center, Boston, Massachusetts, USA.
Xochitl C MorganHarvard T.H. Chan Microbiome in Public Health Center, Boston, Massachusetts, USA.
Curtis HuttenhowerDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.ORCID 0000-0002-1110-0096
Wendy S GarrettDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.ORCID 0000-0002-5092-0150

Funding

Gut microbiota and inflammatory monocytes in colorectal cancerR01CA154426 · NCI · HARVARD UNIVERSITY D/B/A HARVARD SCHOOL OF PUBLIC HEALTH · PI GARRETT, WENDY S. · 2011 to 2025
$5.2M
Cancer Research UK (CRUK)HHS | NIH | National Cancer Institute (NCI) R01CA154426NCI NIH HHS R01 CA154426
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Bacterial ProteinsColorectal NeoplasmsFusobacteriaFusobacteriumGastrointestinal MicrobiomeLectinsVirulence FactorsFecesGenome, BacterialHumansMultigene FamilyBacterial ProteinsLectinsVirulence Factorsfap2FicFusobacterium animalisoncomicrobevirulence factor

Identifiers

PMID39807864
PMCPMC11796403

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.