Evidence map›Paper›PMID 39804955›Full record

ArticleG3 (Bethesda, Md.)2025

A new Drosophila melanogaster research resource: CRISPR-induced mutations for clonal analysis of fourth chromosome genes.

Bonnie M Weasner, Brandon P Weasner, Kevin R Cook, Michael J Stinchfield, Shu Kondo, Kuniaki Saito, Justin P Kumar, Stuart J Newfeld

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. ThemicroPublication biology · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Bonnie M WeasnerDepartment of Biology, Indiana University, 1001 E. Third St., Bloomington, IN 47405, USA.
Brandon P WeasnerDepartment of Biology, Indiana University, 1001 E. Third St., Bloomington, IN 47405, USA.
Kevin R CookBloomington Drosophila Stock Center, Department of Biology, Indiana University, 1001 E. Third St., Bloomington, IN 47405, USA.ORCID 0000-0001-9260-364X
Michael J StinchfieldSchool of Life Sciences, Arizona State University, Tempe, AZ 85287, USA.ORCID 0000-0002-6307-7270
Shu KondoInvertebrate Genetics Laboratory, National Institute of Genetics, Research Organization of Information and Systems, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.ORCID 0000-0002-4625-8379
Kuniaki SaitoInvertebrate Genetics Laboratory, National Institute of Genetics, Research Organization of Information and Systems, 1111 Yata, Mishima, Shizuoka 411-8540, Japan.ORCID 0000-0001-8233-9283
Justin P KumarDepartment of Biology, Indiana University, 1001 E. Third St., Bloomington, IN 47405, USA.ORCID 0000-0001-9991-7932
Stuart J NewfeldSchool of Life Sciences, Arizona State University, Tempe, AZ 85287, USA.ORCID 0000-0003-1400-7978

Funding

Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
FlyBase: A Drosophila Genomic and Genetic DatabaseU24HG013300 · NHGRI · HARVARD UNIVERSITY · PI NORBERT PERRIMON · 2024 to 2026
$6.2M
Comprehensive Resource for the Drosophila 4th chromosomeR24OD028242 · OD · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI STUART J NEWFELD · 2020 to 2026
$5.4M
NHGRI NIH HHS U24 HG013300NIH HHS P40 OD018537NIH HHS R24 OD028242
6 · The paper itself

Abstract

As part of an ongoing effort to generate comprehensive resources for the experimental analysis of fourth chromosome genes in Drosophila melanogaster, the Fourth Chromosome Resource Project has used CRISPR mutagenesis with single guide RNAs to isolate mutations in 62 of the 80 fourth chromosome, protein-coding genes. These mutations were induced on a fourth chromosome bearing a basal FRT insertion to facilitate experimental approaches involving FLP recombinase-induced mitotic recombination. To permit straightforward comparisons among mutant stocks, most of the mutations were generated on isogenic fourth chromosomes, which were then crossed into a common genetic background. Of the 119 mutations, 84 are frameshift mutations likely to be null alleles, 29 are small, in-frame deletions, and 6 have yet to be characterized molecularly. The mutations were tested for recessive lethal, female-sterile, and visible phenotypes. Stable stocks for most of the mutations have been submitted to repositories in the United States and Japan for public distribution.

Indexed as

Chromosomes, InsectClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Cas SystemsDrosophila melanogasterMutationAnimalsFemaleMalePhenotypeCRISPRDrosophila melanogasterfourth chromosomeFourth Chromosome Resource Projectmutation

Identifiers

PMID39804955
PMCPMC11917476

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.