Evidence map›Paper›PMID 39804924›Full record

ArticlePLoS pathogens2025

Mutations in chikungunya virus nsP4 decrease viral fitness and sensitivity to the broad-spectrum antiviral 4'-Fluorouridine.

Peiqi Yin, Elizabeth B Sobolik, Nicholas A May, Sainan Wang, Atef Fayed, Dariia Vyshenska, Adam M Drobish, M Guston Parks, Laura Sandra Lello, Andres Merits and 3 more

Abstract read
In one paragraph

Article in PLoS pathogens, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Peiqi YinDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York, United States of America.ORCID 0000-0003-0482-7825
Elizabeth B SobolikVirology Division, Department of Laboratory Medicine and Pathology, University of Washington Medical Center, Seattle, Washington, United States of America.
Nicholas A MayDepartment of Immunology and Microbiology, University of Colorado School of Medicine, Aurora, Colorado, United States of America.
Sainan WangInstitute of Bioengineering, University of Tartu, Tartu, Estonia.
Atef FayedDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Dariia VyshenskaVirology Division, Department of Laboratory Medicine and Pathology, University of Washington Medical Center, Seattle, Washington, United States of America.
Adam M DrobishDepartment of Immunology and Microbiology, University of Colorado School of Medicine, Aurora, Colorado, United States of America.
M Guston ParksDepartment of Immunology and Microbiology, University of Colorado School of Medicine, Aurora, Colorado, United States of America.
Laura Sandra LelloInstitute of Bioengineering, University of Tartu, Tartu, Estonia.
Andres MeritsInstitute of Bioengineering, University of Tartu, Tartu, Estonia.ORCID 0000-0001-8193-0071
Thomas E MorrisonDepartment of Immunology and Microbiology, University of Colorado School of Medicine, Aurora, Colorado, United States of America.ORCID 0000-0002-1811-2938
Alexander L GreningerVirology Division, Department of Laboratory Medicine and Pathology, University of Washington Medical Center, Seattle, Washington, United States of America.ORCID 0000-0002-7443-0527
Margaret KielianDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York, United States of America.ORCID 0000-0002-7395-4791

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI Ulrich Steidl · 1985 to 2026
$111.2M
Project 6 - Development of Antivirals against AlphavirusesU19AI171403 · NIAID · EMORY UNIVERSITY · PI George Robert Painter, Richard K. Plemper · 2022 to 2026
$59.7M
NCI NIH HHS P30 CA013330NIAID NIH HHS U19 AI171403
6 · The paper itself

Abstract

Chikungunya virus (CHIKV) is an arthritogenic alphavirus that has re-emerged to cause large outbreaks of human infections worldwide. There are currently no approved antivirals for treatment of CHIKV infection. Recently, we reported that the ribonucleoside analog 4'-fluorouridine (4'-FlU) is a highly potent inhibitor of CHIKV replication, and targets the viral nsP4 RNA dependent RNA polymerase. In mouse models, oral therapy with 4'-FlU diminished viral tissue burdens and virus-induced disease signs. To provide critical evidence for the potential of 4'-FlU as a CHIKV antiviral, here we selected for CHIKV variants with decreased 4'-FlU sensitivity, identifying two pairs of mutations in nsP2 and nsP4. The nsP4 mutations Q192L and C483Y were predominantly responsible for reduced sensitivity. These variants were still inhibited by higher concentrations of 4'-FlU, and the mutations did not change nsP4 fidelity or provide a virus fitness advantage in vitro or in vivo. Pathogenesis studies in mice showed that the nsP4-C483Y variant caused similar disease and viral tissue burden as WT CHIKV, while the nsP4-Q192L variant was strongly attenuated. Together these results support the potential of 4'-FlU to be an important antiviral against CHIKV.

Indexed as

Antiviral AgentsChikungunya FeverChikungunya virusViral Nonstructural ProteinsAnimalsDrug Resistance, ViralHumansMiceMutationVirus ReplicationAntiviral AgentsViral Nonstructural Proteins

Identifiers

PMID39804924
PMCPMC11759387

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.