Evidence map›Paper›PMID 39803547›Full record

ArticlebioRxiv : the preprint server for biology2025

Conformational dynamics and multi-modal interaction of Paxillin with the Focal Adhesion Targeting Domain.

Supriyo Bhattacharya, Yanan He, Yihong Chen, Atish Mohanty, Alexander Grishaev, Prakash Kulkarni, Ravi Salgia, John Orban

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Supriyo BhattacharyaDepartment of Computational and Quantitative Medicine, Beckman Research Institute of the City of Hope, Duarte National Medical Center, CA 91010-3000, USA.ORCID 0000-0003-0483-2149
Yanan HeUniversity of Maryland Institute for Bioscience and Biotechnology Research, Rockville, MD, 20850, USA.
Yihong ChenUniversity of Maryland Institute for Bioscience and Biotechnology Research, Rockville, MD, 20850, USA.
Atish MohantyDepartment of Medical Oncology and Therapeutics Research, City of Hope National Medical Center, Duarte, CA 91010-3000, USA.ORCID 0000-0003-1464-3165
Alexander GrishaevUniversity of Maryland Institute for Bioscience and Biotechnology Research, Rockville, MD, 20850, USA.ORCID 0000-0002-9347-2327
Prakash KulkarniDepartment of Medical Oncology and Therapeutics Research, City of Hope National Medical Center, Duarte, CA 91010-3000, USA.
Ravi SalgiaDepartment of Medical Oncology and Therapeutics Research, City of Hope National Medical Center, Duarte, CA 91010-3000, USA.ORCID 0000-0001-9643-7626
John OrbanUniversity of Maryland Institute for Bioscience and Biotechnology Research, Rockville, MD, 20850, USA.ORCID 0000-0002-3895-1800

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI John Charles Williams · 1985 to 2026
$86.3M
NCI NIH HHS P30 CA033572
6 · The paper itself

Abstract

Paxillin (PXN) and focal adhesion kinase (FAK) are two major components of the focal adhesion complex, a multiprotein structure linking the intracellular cytoskeleton to the cell exterior. The interaction between the disordered N-terminal domain of PXN and the C-terminal targeting domain of FAK (FAT) is necessary and sufficient for localizing FAK to focal adhesions. Furthermore, PXN serves as a platform for recruiting other proteins that together control the dynamic changes needed for cell migration and survival. Here, we show that the PXN N-domain undergoes significant compaction upon FAT binding, forming a 48-kDa multi-modal complex with four major interconverting states. Although the complex is flexible, each state has unique sets of contacts involving disordered regions that are both highly represented in ensembles and conserved. PXN being a hub protein, the results provide a structural basis for understanding how shifts in the multi-state equilibrium (e.g. through ligand binding and phosphorylation) may rewire cellular networks leading to phenotypic changes.

Identifiers

PMID39803547
PMCPMC11722443

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.