Evidence map›Paper›PMID 39802796›Full record

ArticlemedRxiv : the preprint server for health sciences2024

Structural variation in nebulin and its implications on phenotype and inheritance: establishing a dominant distal phenotype caused by large deletions.

Lydia Sagath, Kirsi Kiiski, Kireshnee Naidu, Krutik Patel, Per Harald Jonson, Milla Laarne, Djurdja Djordjevic, Grace Yoon, Anna LaGroon, Curtis Rogers and 21 more

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

31 authors.

Lydia SagathFolkhälsan Research Center, Helsinki, Finland.ORCID 0000-0002-6754-3830
Kirsi KiiskiFolkhälsan Research Center, Helsinki, Finland.ORCID 0000-0002-1004-9612
Kireshnee NaiduDivision of Neurology, Department of Medicine, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.ORCID 0009-0007-2302-4901
Krutik PatelWellcome Centre for Mitochondrial Research, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, United Kingdom.ORCID 0000-0001-6806-8675
Per Harald JonsonFolkhälsan Research Center, Helsinki, Finland.ORCID 0000-0003-2423-359X
Milla LaarneFolkhälsan Research Center, Helsinki, Finland.ORCID 0000-0001-5690-4779
Djurdja DjordjevicDivision of Neurology, Department of Paediatrics, The Hospital for Sick Children, University of Toronto, Toronto, Canada.ORCID 0009-0002-7872-9080
Grace YoonDivision of Neurology, Department of Paediatrics, The Hospital for Sick Children, University of Toronto, Toronto, Canada.ORCID 0000-0002-0415-4416
Anna LaGroonGreenville Office Greenwood Genetic Center, Greenville, SC, USA.
Curtis RogersGreenville Office Greenwood Genetic Center, Greenville, SC, USA.ORCID 0000-0003-4993-5774
Maureen Kelly GalindoChildren's Clinics for Rehabilitative Services, Tucson, AZ, USA.ORCID 0000-0001-9145-6246
Katalin SchererDepartment of Neurology, University of Arizona, Tucson, AZ, USA.
Erdmute KunstmannPraxis für Humangenetik, Julius-Maximilians-University Würzburg, Germany.ORCID 0009-0002-2599-1691
Erkan KoparirInstitute for Human Genetics, Biocenter, Julius-Maximilians-University Würzburg, Würzburg, Germany.ORCID 0009-0001-5356-9095
Desirée HoDepartment of Diagnostic Genomics, PathWest Laboratory Medicine WA, Nedlands WA 6008, Australia.ORCID 0009-0000-7230-9072
Mark DavisDepartment of Diagnostic Genomics, PathWest Laboratory Medicine WA, Nedlands WA 6008, Australia.ORCID 0000-0002-0626-9030
Purwa JoshiDepartment of Neurology, Wellington Regional Hospital, Wellington, New Zealand.ORCID 0000-0003-1832-1606
Alexander ZygmuntDepartment of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA.ORCID 0000-0002-1857-2029
Rotem OrbachNeuromuscular and Neurogenetic Disorders of Childhood Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-1015-1529
Sandra DonkervoortNeuromuscular and Neurogenetic Disorders of Childhood Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0001-6399-1444
Carsten G BönnemannNeuromuscular and Neurogenetic Disorders of Childhood Section, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-5930-2324
Marco SavareseFolkhälsan Research Center, Helsinki, Finland.ORCID 0000-0002-2591-244X
Andoni Echaniz-LagunaDepartment of Neurology, APHP, CHU de Bicêtre, Le Kremlin-Bicêtre, 94275, France.ORCID 0000-0003-1012-9783
Valérie BiancalanaLaboratoire de Diagnostic Génétique CHRU de Strasbourg, Strasbourg, France.ORCID 0000-0002-8988-5508
Casie A GenettiThe Manton Center for Orphan Disease Research, Division of Genetics and Genomics, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.ORCID 0000-0003-4173-9947
Susan T IannacconeDepartment of Pediatrics and Neurology, UT Southwestern Medical Center, Dallas, TX, USA.ORCID 0000-0003-0851-3516
Alan H BeggsThe Manton Center for Orphan Disease Research, Division of Genetics and Genomics, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA.ORCID 0000-0001-8818-0568
Carina Wallgren-PetterssonFolkhälsan Research Center, Helsinki, Finland.ORCID 0000-0002-1497-2113
Franclo HenningDivision of Neurology, Department of Medicine, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.ORCID 0000-0002-4006-8101
Katarina PelinFolkhälsan Research Center, Helsinki, Finland.ORCID 0000-0002-7040-7266
Vilma-Lotta LehtokariFolkhälsan Research Center, Helsinki, Finland.ORCID 0000-0002-8276-0972

Funding

Genetic Analysis and Manipulation Core (GAEC)P50HD105351 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI SCOTT Loren POMEROY, MUSTAFA SAHIN · 2021 to 2026
$9.4M
NICHD NIH HHS P50 HD105351
6 · The paper itself

Abstract

Introduction: Structural variants (SVs) of the nebulin gene ( Methods: Using custom Comparative Genomic Hybridization arrays, exome sequencing, short-read genome sequencing, custom Droplet Digital PCR, or Sanger sequencing, we identified pathogenic SVs in 35 families with Results: In 23 families, recessive intragenic deletions and duplications or pathogenic gains of the triplicate region segregating with the disease in compound heterozygous form, together with a small variant in trans, were identified. In two families the SV was, however, homozygous. Eight families have not been described previously. In 12 families with a distal myopathy phenotype, eight unique, large deletions encompassing 52 to 97 exons in either heterozygous (n = 10) or mosaic (n = 2) state were identified.In the families where inheritance was recessive, no correlation could be made between the types of variants and the severity of the disease. In contrast, all patients with large dominant deletions in Discussion: For the first time, we establish a clear and statistically significant association between large

Identifiers

PMID39802796
PMCPMC11722492

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.