Evidence map›Paper›PMID 39797760›Full record

ArticleGenes & development2025

NKX2.2 and KLF4 cooperate to regulate α-cell identity.

Elliott P Brooks, McKenna R Casey, Kristen L Wells, Tsung-Yun Liu, Madeline Van Orman, Lori Sussel

Abstract read
In one paragraph

Article in Genes & development, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Elliott P BrooksBarbara Davis Center for Diabetes, University of Colorado Anschutz Medical Campus, Aurora, Colorado 80045, USA.ORCID 0000-0001-6981-1205
McKenna R CaseyBarbara Davis Center for Diabetes, University of Colorado Anschutz Medical Campus, Aurora, Colorado 80045, USA.
Kristen L WellsBarbara Davis Center for Diabetes, University of Colorado Anschutz Medical Campus, Aurora, Colorado 80045, USA.ORCID 0000-0002-7466-8164
Tsung-Yun LiuBarbara Davis Center for Diabetes, University of Colorado Anschutz Medical Campus, Aurora, Colorado 80045, USA.
Madeline Van OrmanBarbara Davis Center for Diabetes, University of Colorado Anschutz Medical Campus, Aurora, Colorado 80045, USA.
Lori SusselBarbara Davis Center for Diabetes, University of Colorado Anschutz Medical Campus, Aurora, Colorado 80045, USA lori.sussel@cuanschutz.edu.ORCID 0000-0003-4672-7304

Funding

University of Colorado Anschutz Medical Campus DRCP30DK116073 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI LORI SUSSEL · 2020 to 2026
$10.8M
Regulation of Pancreatic Islet Cell FateR01DK082590 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI LORI SUSSEL · 2009 to 2026
$7.3M
Intersection of signaling pathways and transcription factors regulating islet developmentR01DK118155 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI PAUL J GADUE, David Lorberbaum · 2018 to 2026
$4.9M
Alternative RNA splicing events contribute to the onset of islet dysfunction in T1DU01DK127505 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI NAKAYASU, ERNESTO SATOSHI, SUSSEL, LORI · 2020 to 2023
$2.9M
Mathematical Modeling of Neurons and Endocrine CellsZ01DK013028 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI SHERMAN, ARTHUR · 2007 to 2008
$208k
Determining the role of Nkx2.2 in the maintenance of pancreatic a cell identityF31DK130281 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI BROOKS, ELLIOTT · 2021 to 2023
$102k
Intramural NIH HHS Z01 DK013028NIDDK NIH HHS F31 DK130281NIDDK NIH HHS P30 DK116073NIDDK NIH HHS R01 DK082590NIDDK NIH HHS R01 DK118155NIDDK NIH HHS U01 DK127505
6 · The paper itself

Abstract

Transcription factors (TFs) are indispensable for maintaining cell identity through regulating cell-specific gene expression. Distinct cell identities derived from a common progenitor are frequently perpetuated by shared TFs, yet the mechanisms that enable these TFs to regulate cell-specific targets are poorly characterized. We report that the TF NKX2.2 is critical for the identity of pancreatic islet α cells by directly activating α-cell genes and repressing alternate islet cell fate genes. When compared with the known role of NKX2.2 in islet β cells, we demonstrate that NKX2.2 regulates α-cell genes, facilitated in part by α-cell-specific DNA binding at gene promoters. Furthermore, we have identified the reprogramming factor KLF4 as having enriched expression in α cells, where it co-occupies NKX2.2-bound α-cell promoters, is necessary for NKX2.2 promoter occupancy in α cells, and coregulates many NKX2.2 α-cell transcriptional targets. Overexpression of

Indexed as

Gene Expression RegulationGene Expression Regulation, DevelopmentalGlucagon-Secreting CellsHomeodomain ProteinsKruppel-Like Transcription FactorsTranscription FactorsAnimalsCell DifferentiationHomeobox Protein Nkx-2.2Kruppel-Like Factor 4MicePromoter Regions, GeneticProtein BindingZebrafish ProteinsHomeobox Protein Nkx-2.2Homeodomain ProteinsKlf4 protein, mouseKlf4 protein, ratKruppel-Like Factor 4Kruppel-Like Transcription Factorsnkx2.2b protein, zebrafishNkx2-2 protein, mouseTranscription FactorsZebrafish ProteinsKLF4NKX2.2pancreatic isletstranscriptional regulationα cells

Identifiers

PMID39797760
PMCPMC11789634

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.